Protein–RNA interactions for Protein: Q9R053

Scn11a, Sodium channel protein type 11 subunit alpha, mousemouse

Predictions only

Length 1,765 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn11aQ9R053 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm24942-201ENSMUST00000158328 114 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Vmn2r-ps33-201ENSMUST00000175691 904 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm28872-201ENSMUST00000191518 158 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm44348-201ENSMUST00000200165 122 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm43979-201ENSMUST00000203179 475 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm43978-201ENSMUST00000203491 451 ntBASIC1.47□□□□□ -2.17
Scn11aQ9R053 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.46□□□□□ -2.18
Scn11aQ9R053 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Scn11aQ9R053 Rab11fip4os2-202ENSMUST00000132921 355 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Scn11aQ9R053 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC1.46□□□□□ -2.18
Scn11aQ9R053 Gm26414-201ENSMUST00000157674 269 ntBASIC1.46□□□□□ -2.18
Scn11aQ9R053 Gm9613-201ENSMUST00000171662 196 ntBASIC1.46□□□□□ -2.18
Scn11aQ9R053 Gm27265-201ENSMUST00000183559 77 ntBASIC1.46□□□□□ -2.18
Scn11aQ9R053 Gm44830-201ENSMUST00000207667 584 ntBASIC1.46□□□□□ -2.18
Scn11aQ9R053 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Scn11aQ9R053 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Scn11aQ9R053 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
Scn11aQ9R053 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.45□□□□□ -2.18
Scn11aQ9R053 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC1.45□□□□□ -2.18
Scn11aQ9R053 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Scn11aQ9R053 AC153964.2-201ENSMUST00000217704 2474 ntBASIC1.45□□□□□ -2.18
Scn11aQ9R053 Gm14940-201ENSMUST00000119309 495 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm12731-201ENSMUST00000120932 268 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm23718-201ENSMUST00000157350 307 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm25520-201ENSMUST00000158389 118 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm28647-201ENSMUST00000188416 197 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm18546-201ENSMUST00000197245 676 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm5317-201ENSMUST00000204445 847 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm7726-201ENSMUST00000206241 231 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Olfr1123-201ENSMUST00000054974 972 ntAPPRIS P2 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm14751-201ENSMUST00000117693 222 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm13577-201ENSMUST00000121365 205 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm22345-201ENSMUST00000122644 107 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm23886-201ENSMUST00000122684 313 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm24467-201ENSMUST00000157887 126 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm28448-201ENSMUST00000188547 428 ntTSL 5 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm29263-201ENSMUST00000188718 463 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm28384-201ENSMUST00000189079 463 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Scn11aQ9R053 AC122210.1-201ENSMUST00000217923 675 ntTSL 3 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.44□□□□□ -2.18
Scn11aQ9R053 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Scn11aQ9R053 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm12238-201ENSMUST00000127764 124 ntBASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm23435-201ENSMUST00000157183 156 ntBASIC1.43□□□□□ -2.18
Scn11aQ9R053 Igkv1-108-201ENSMUST00000198926 298 ntBASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm45367-201ENSMUST00000210171 347 ntBASIC1.43□□□□□ -2.18
Scn11aQ9R053 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.43□□□□□ -2.18
Scn11aQ9R053 Gm25495-201ENSMUST00000104431 131 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm26186-201ENSMUST00000157689 125 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm22136-201ENSMUST00000158751 268 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm28151-201ENSMUST00000189404 951 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm17935-201ENSMUST00000196649 772 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm45273-201ENSMUST00000211559 281 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm10794-201ENSMUST00000099624 207 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm42536-201ENSMUST00000197562 1613 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Scn11aQ9R053 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm26701-201ENSMUST00000181571 234 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm27607-201ENSMUST00000185162 122 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm18598-201ENSMUST00000207724 597 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm35558-202ENSMUST00000221819 499 ntBASIC1.42□□□□□ -2.18
Scn11aQ9R053 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Scn11aQ9R053 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC1.42□□□□□ -2.18
Scn11aQ9R053 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC1.42□□□□□ -2.18
Scn11aQ9R053 Gm22516-201ENSMUST00000158266 124 ntBASIC1.41□□□□□ -2.18
Scn11aQ9R053 Gm38329-201ENSMUST00000193473 427 ntBASIC1.41□□□□□ -2.18
Scn11aQ9R053 1700052H01Rik-202ENSMUST00000196973 429 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Scn11aQ9R053 AC163664.1-201ENSMUST00000226251 1248 ntBASIC1.41□□□□□ -2.18
Scn11aQ9R053 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm12235-201ENSMUST00000118596 170 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm5277-201ENSMUST00000164923 556 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm15143-201ENSMUST00000178180 714 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 AC153662.1-201ENSMUST00000222220 270 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 AC173481.1-201ENSMUST00000223351 270 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 AC121942.2-201ENSMUST00000223824 600 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm26493-201ENSMUST00000083155 136 ntBASIC1.4□□□□□ -2.19
Scn11aQ9R053 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Scn11aQ9R053 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
Scn11aQ9R053 Olfr722-201ENSMUST00000053290 1582 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
Scn11aQ9R053 Gm25992-201ENSMUST00000102437 109 ntBASIC1.39□□□□□ -2.19
Scn11aQ9R053 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC1.39□□□□□ -2.19
Scn11aQ9R053 Gm5224-201ENSMUST00000183060 350 ntBASIC1.39□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 146.8 ms