Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Phex-201ENSMUST00000079945 6265 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm5798-201ENSMUST00000164613 1751 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Rpl23a-201ENSMUST00000102483 560 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm13457-201ENSMUST00000117885 267 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm6265-201ENSMUST00000149263 231 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm26195-201ENSMUST00000175035 101 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Mir7682-201ENSMUST00000198467 58 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 AC122464.1-201ENSMUST00000202789 770 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm44784-201ENSMUST00000207396 460 ntTSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 AC133598.4-202ENSMUST00000225267 469 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 CT485608.1-201ENSMUST00000228759 389 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm24611-201ENSMUST00000083272 107 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 6720427I07Rik-201ENSMUST00000181490 2300 ntBASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Polk-205ENSMUST00000221899 2319 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 4932415D10Rik-202ENSMUST00000217661 15111 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Olfr107-202ENSMUST00000215894 2512 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sec61a2Q9JLR1 Olfr133-204ENSMUST00000215549 2944 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 AC153522.2-201ENSMUST00000218389 3853 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Mir701-201ENSMUST00000102208 109 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Snord66-201ENSMUST00000104051 75 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm23481-201ENSMUST00000104173 131 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm26387-201ENSMUST00000104238 132 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm23319-201ENSMUST00000104467 131 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm14652-201ENSMUST00000118479 235 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm15760-201ENSMUST00000119553 283 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm14877-201ENSMUST00000119803 478 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm25177-201ENSMUST00000122634 117 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm11195-201ENSMUST00000135030 441 ntTSL 3 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm11281-201ENSMUST00000141391 576 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm5963-201ENSMUST00000143451 236 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm23957-201ENSMUST00000157209 90 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm25427-201ENSMUST00000157605 103 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm22389-201ENSMUST00000158193 301 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm23474-201ENSMUST00000158884 75 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm44085-201ENSMUST00000205056 372 ntTSL 3 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm45315-201ENSMUST00000209283 333 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm46998-201ENSMUST00000221444 330 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm5265-201ENSMUST00000076828 342 ntBASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Olfr782-202ENSMUST00000213970 1944 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Sec61a2Q9JLR1 Gm650-201ENSMUST00000144428 1551 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm23705-201ENSMUST00000104370 130 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm26028-201ENSMUST00000158660 294 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Vmn1r103-201ENSMUST00000163461 918 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Vmn1r151-201ENSMUST00000166079 918 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm20698-201ENSMUST00000175657 233 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm24487-201ENSMUST00000178017 63 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm21980-201ENSMUST00000180032 143 ntTSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Mir6996-201ENSMUST00000183922 61 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Mir6933-201ENSMUST00000184982 81 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm5372-201ENSMUST00000187540 409 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm44473-201ENSMUST00000204039 152 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm44977-201ENSMUST00000205283 420 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 AC160863.1-201ENSMUST00000218412 317 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm25800-201ENSMUST00000082636 134 ntBASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Vmn2r93-201ENSMUST00000079206 2574 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Vmn1r46-204ENSMUST00000228231 13338 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Sec61a2Q9JLR1 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Sec61a2Q9JLR1 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
Sec61a2Q9JLR1 Gm26500-201ENSMUST00000101867 106 ntBASIC3.59□□□□□ -1.83
Sec61a2Q9JLR1 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 154.2 ms