Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm2878-201ENSMUST00000170173 486 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm23933-201ENSMUST00000178405 79 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm8532-201ENSMUST00000179174 461 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm27761-201ENSMUST00000184091 131 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm27753-201ENSMUST00000184742 203 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC2□□□□□ -2.09
Lima1Q9ERG0 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Igkv1-108-201ENSMUST00000198926 298 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm43493-201ENSMUST00000199837 202 ntBASIC2□□□□□ -2.09
Lima1Q9ERG0 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm45490-201ENSMUST00000210084 742 ntTSL 3 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC2□□□□□ -2.09
Lima1Q9ERG0 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm13876-201ENSMUST00000118451 261 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm12878-201ENSMUST00000118744 332 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Mup-ps15-201ENSMUST00000121741 539 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm23754-201ENSMUST00000157576 63 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm24237-201ENSMUST00000157790 132 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm22159-201ENSMUST00000158412 130 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm23342-201ENSMUST00000158958 115 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm17061-201ENSMUST00000163167 499 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm27399-201ENSMUST00000184250 78 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm20776-201ENSMUST00000189940 700 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm37119-201ENSMUST00000195691 389 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 AC129017.1-201ENSMUST00000228363 270 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.99□□□□□ -2.09
Lima1Q9ERG0 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm24049-201ENSMUST00000102409 100 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm22543-201ENSMUST00000104347 94 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm14879-201ENSMUST00000117308 507 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm11268-201ENSMUST00000118347 267 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm16411-201ENSMUST00000122164 1100 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm12325-201ENSMUST00000135553 320 ntTSL 5 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm15279-201ENSMUST00000155593 288 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm9071-201ENSMUST00000165915 474 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm23813-201ENSMUST00000175153 77 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Vmn2r-ps118-201ENSMUST00000176785 908 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Mir6541-201ENSMUST00000183649 110 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm27942-201ENSMUST00000184669 101 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm29263-201ENSMUST00000188718 463 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm28384-201ENSMUST00000189079 463 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm29288-201ENSMUST00000191582 901 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm43804-201ENSMUST00000198280 456 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm44477-201ENSMUST00000199661 110 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm19457-201ENSMUST00000200995 448 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 AC124569.1-201ENSMUST00000225932 101 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Tas2r117-201ENSMUST00000068302 1158 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm22740-201ENSMUST00000083439 109 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Lima1Q9ERG0 Ifi214-203ENSMUST00000139092 2888 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm14599-201ENSMUST00000120469 474 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm15223-201ENSMUST00000120989 826 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm11384-201ENSMUST00000121376 303 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm12956-201ENSMUST00000122184 414 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm24770-201ENSMUST00000158505 92 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm23387-201ENSMUST00000158586 107 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Mir7016-201ENSMUST00000184308 72 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm7837-201ENSMUST00000190873 412 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm7871-201ENSMUST00000195346 618 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm43083-201ENSMUST00000199594 476 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Igkv11-114-201ENSMUST00000200013 346 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm44058-201ENSMUST00000204335 467 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Lima1Q9ERG0 CT572985.2-201ENSMUST00000220496 211 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Mir421-201ENSMUST00000083575 76 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm27013-202ENSMUST00000205067 1436 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.97□□□□□ -2.09
Lima1Q9ERG0 Gm25094-201ENSMUST00000103992 131 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm14358-201ENSMUST00000118458 403 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm12235-201ENSMUST00000118596 170 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm12871-201ENSMUST00000118758 438 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm11430-201ENSMUST00000121317 217 ntBASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC1.96□□□□□ -2.1
Lima1Q9ERG0 Gm17161-201ENSMUST00000169187 524 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms