Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm27527-201ENSMUST00000183903 99 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Gm43115-201ENSMUST00000196244 160 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 AC131085.1-201ENSMUST00000224746 656 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 AC168880.1-201ENSMUST00000225113 707 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 AC158142.2-201ENSMUST00000227892 635 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Olfr815-201ENSMUST00000071557 951 ntBASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.83□□□□□ -1.96
Scn4aQ9ER60 Vmn1r185-206ENSMUST00000227479 6525 ntAPPRIS P1 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm13046-201ENSMUST00000117391 501 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm15112-201ENSMUST00000120152 860 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm23167-201ENSMUST00000157155 103 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm23777-201ENSMUST00000158994 259 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm18956-201ENSMUST00000192857 480 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm18892-201ENSMUST00000217628 881 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 n-R5s96-201ENSMUST00000082574 124 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm24254-201ENSMUST00000083702 104 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm15176-201ENSMUST00000117734 135 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm13775-201ENSMUST00000153865 751 ntTSL 3 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm26101-201ENSMUST00000157246 105 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm17186-201ENSMUST00000171742 456 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Mir7678-201ENSMUST00000185076 71 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm19137-201ENSMUST00000213790 1164 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 CT010455.1-201ENSMUST00000218579 413 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm24624-201ENSMUST00000082617 164 ntBASIC2.82□□□□□ -1.96
Scn4aQ9ER60 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm16588-201ENSMUST00000162889 355 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm8151-201ENSMUST00000184817 871 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm28745-201ENSMUST00000190069 305 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm38149-201ENSMUST00000191943 339 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm37213-201ENSMUST00000193077 586 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm37576-201ENSMUST00000194228 372 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm37709-201ENSMUST00000195074 600 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Igkv13-80-1-201ENSMUST00000197926 255 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Scn4aQ9ER60 CR974485.1-201ENSMUST00000222408 402 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Spinkl-201ENSMUST00000066328 593 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Gm44821-201ENSMUST00000208212 2002 ntBASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Olfr681-203ENSMUST00000215517 4324 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Scn4aQ9ER60 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm13454-201ENSMUST00000118166 483 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm12042-201ENSMUST00000120479 301 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm4916-201ENSMUST00000126139 642 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm25341-201ENSMUST00000157461 268 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm25976-201ENSMUST00000158695 130 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm3221-201ENSMUST00000164869 440 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm29389-201ENSMUST00000191562 352 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm37616-201ENSMUST00000193974 322 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm42818-201ENSMUST00000198869 987 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm25126-201ENSMUST00000083343 102 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm25008-201ENSMUST00000083809 81 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.8□□□□□ -1.96
Scn4aQ9ER60 Gm42482-201ENSMUST00000198904 1947 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Mir706-201ENSMUST00000102262 84 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm14358-201ENSMUST00000118458 403 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm12550-201ENSMUST00000118478 329 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Vmn1r-ps24-201ENSMUST00000175772 900 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm19123-201ENSMUST00000190716 651 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm29740-201ENSMUST00000193182 655 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm38154-201ENSMUST00000195444 340 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm45023-201ENSMUST00000207951 379 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm18557-201ENSMUST00000218710 433 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm46993-201ENSMUST00000220708 259 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm35558-202ENSMUST00000221819 499 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm14129-201ENSMUST00000122436 291 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm25198-201ENSMUST00000178574 110 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm42506-201ENSMUST00000202009 150 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm42960-201ENSMUST00000202160 241 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Gm44060-201ENSMUST00000204440 410 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC2.79□□□□□ -1.96
Scn4aQ9ER60 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Mir148b-201ENSMUST00000083626 97 ntBASIC2.79□□□□□ -1.96
Scn4aQ9ER60 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm43718-201ENSMUST00000197524 1857 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm37387-201ENSMUST00000192201 1806 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Gm24984-201ENSMUST00000104454 133 ntBASIC2.78□□□□□ -1.96
Scn4aQ9ER60 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 98.3 ms