Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Gm12102-201ENSMUST00000118251 604 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm15094-201ENSMUST00000118394 1131 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC2.57□□□□□ -2
Vps35Q9EQH3 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC2.57□□□□□ -2
Vps35Q9EQH3 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm17377-201ENSMUST00000165184 207 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm3104-201ENSMUST00000171004 473 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 AC154297.1-201ENSMUST00000171334 397 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm20718-201ENSMUST00000176058 259 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.57□□□□□ -2
Vps35Q9EQH3 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm15235-201ENSMUST00000200572 194 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm44449-201ENSMUST00000203610 153 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm44903-201ENSMUST00000206840 130 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm44609-201ENSMUST00000207157 460 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC2.57□□□□□ -2
Vps35Q9EQH3 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.57□□□□□ -2
Vps35Q9EQH3 AC159297.2-201ENSMUST00000219567 1075 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Vps35Q9EQH3 Gm5670-201ENSMUST00000093546 372 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 AC164164.1-201ENSMUST00000223245 2340 ntBASIC2.57□□□□□ -2
Vps35Q9EQH3 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm44644-202ENSMUST00000208825 3133 ntTSL 2 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Mir582-201ENSMUST00000103758 81 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm13510-201ENSMUST00000118659 429 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm12155-201ENSMUST00000121267 160 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm24910-201ENSMUST00000157289 272 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm23317-201ENSMUST00000157999 129 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm9696-202ENSMUST00000191541 830 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm36984-201ENSMUST00000192770 235 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm43264-201ENSMUST00000202284 325 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm19252-201ENSMUST00000204705 305 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm44135-201ENSMUST00000205221 368 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm44830-201ENSMUST00000207667 584 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm45452-201ENSMUST00000210905 177 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Pdcd10-201ENSMUST00000029424 907 ntTSL 5 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Gm24948-201ENSMUST00000082866 207 ntBASIC2.56□□□□□ -2
Vps35Q9EQH3 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Vps35Q9EQH3 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.56□□□□□ -2
Vps35Q9EQH3 Vmn2r72-201ENSMUST00000063425 2571 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.55□□□□□ -2
Vps35Q9EQH3 Igkv8-16-201ENSMUST00000103392 362 ntAPPRIS ALT2 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm22091-201ENSMUST00000116908 127 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm12386-201ENSMUST00000117380 688 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm15659-201ENSMUST00000118881 341 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm14940-201ENSMUST00000119309 495 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm14736-201ENSMUST00000121470 336 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm15986-201ENSMUST00000122153 400 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm25270-201ENSMUST00000122606 138 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm22236-201ENSMUST00000157093 106 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm26099-201ENSMUST00000157248 109 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm26411-201ENSMUST00000157668 107 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm24962-201ENSMUST00000157917 109 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm22098-201ENSMUST00000157930 85 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Ifi206-202ENSMUST00000169797 429 ntTSL 5 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm18417-201ENSMUST00000176564 648 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm22716-201ENSMUST00000177596 107 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm28986-201ENSMUST00000189682 678 ntTSL 5 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm37059-201ENSMUST00000191723 678 ntTSL 5 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm7871-201ENSMUST00000195346 618 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm44060-201ENSMUST00000204440 410 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm45049-201ENSMUST00000207586 591 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm45590-201ENSMUST00000209715 262 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm4945-201ENSMUST00000075152 453 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm9174-201ENSMUST00000078149 255 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm23848-201ENSMUST00000083826 106 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm23503-201ENSMUST00000083903 107 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
Vps35Q9EQH3 Gm38071-201ENSMUST00000195792 3378 ntBASIC2.55□□□□□ -2
Vps35Q9EQH3 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Mir682-201ENSMUST00000102281 96 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm25376-201ENSMUST00000104340 133 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm12584-201ENSMUST00000117109 1105 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm13806-201ENSMUST00000117822 325 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm12639-201ENSMUST00000121400 493 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm13356-201ENSMUST00000121678 335 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm23599-201ENSMUST00000157261 251 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm23588-201ENSMUST00000157659 99 ntBASIC2.54□□□□□ -2
Vps35Q9EQH3 Gm23559-201ENSMUST00000157824 103 ntBASIC2.54□□□□□ -2
Retrieved 100 of 76,532 protein–RNA pairs in 92.5 ms