Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm6113-201ENSMUST00000180319 639 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm43765-201ENSMUST00000196303 893 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm44483-201ENSMUST00000197203 97 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Gm32877-201ENSMUST00000197419 709 ntTSL 5 BASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 AC168062.2-201ENSMUST00000228907 422 ntBASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Cpsf1Q9EPU4 Olfr1109-203ENSMUST00000217066 2384 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
Cpsf1Q9EPU4 Gm11556-201ENSMUST00000120751 288 ntBASIC1.59□□□□□ -2.15
Cpsf1Q9EPU4 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
Cpsf1Q9EPU4 Gm23140-201ENSMUST00000082487 107 ntBASIC1.59□□□□□ -2.15
Cpsf1Q9EPU4 Gm26493-201ENSMUST00000083155 136 ntBASIC1.59□□□□□ -2.15
Cpsf1Q9EPU4 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.59□□□□□ -2.16
Cpsf1Q9EPU4 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm13331-201ENSMUST00000117500 448 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm13082-201ENSMUST00000118877 561 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm22519-201ENSMUST00000158270 178 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm27419-201ENSMUST00000184576 109 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm31230-201ENSMUST00000199725 785 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm8041-201ENSMUST00000199755 616 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
Cpsf1Q9EPU4 Gm14833-201ENSMUST00000118345 1027 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm22136-201ENSMUST00000158751 268 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm26363-201ENSMUST00000158866 83 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm21064-202ENSMUST00000190583 278 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm19066-201ENSMUST00000193232 1078 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 AC133156.1-202ENSMUST00000227284 363 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm15161-201ENSMUST00000117340 387 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Mir7241-201ENSMUST00000184532 64 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Olfr1409-ps1-201ENSMUST00000194013 252 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Gm43739-201ENSMUST00000198294 307 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.57□□□□□ -2.16
Cpsf1Q9EPU4 Olfr183-203ENSMUST00000213465 2200 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Olfr183-205ENSMUST00000214916 2249 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm22469-201ENSMUST00000104118 133 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm15281-201ENSMUST00000125181 351 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm23324-201ENSMUST00000157421 131 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm6639-204ENSMUST00000199182 800 ntTSL 5 BASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm45116-201ENSMUST00000207392 275 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Snord14a-201ENSMUST00000082807 87 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm23455-201ENSMUST00000083331 100 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Mir10b-201ENSMUST00000083566 68 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Mir22-201ENSMUST00000083595 95 ntBASIC1.56□□□□□ -2.16
Cpsf1Q9EPU4 Gm12891-201ENSMUST00000119358 240 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm15452-201ENSMUST00000119877 240 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm14366-201ENSMUST00000121970 730 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm29051-201ENSMUST00000190184 369 ntTSL 5 BASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm37801-201ENSMUST00000194754 274 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm35558-202ENSMUST00000221819 499 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 AC157654.1-201ENSMUST00000224130 820 ntBASIC1.55□□□□□ -2.16
Cpsf1Q9EPU4 Gm14069-201ENSMUST00000120815 229 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Gm25971-201ENSMUST00000158953 286 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Gm26701-201ENSMUST00000181571 234 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Gm45456-201ENSMUST00000210841 243 ntBASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Cpsf1Q9EPU4 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 AC124456.1-201ENSMUST00000217391 2597 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Gm37941-201ENSMUST00000192170 2309 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Vmn2r-ps121-201ENSMUST00000176230 802 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Gm7726-201ENSMUST00000206241 231 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 A930027P06Rik-201ENSMUST00000221298 2975 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Gm45577-201ENSMUST00000210206 2287 ntBASIC1.53□□□□□ -2.16
Cpsf1Q9EPU4 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC1.53□□□□□ -2.17
Cpsf1Q9EPU4 Gm7171-201ENSMUST00000177413 1349 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm11352-201ENSMUST00000119264 517 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Lsm5-203ENSMUST00000176595 274 ntTSL 5 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm27161-201ENSMUST00000183960 562 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Trbv6-201ENSMUST00000193743 276 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Zc3h14-201ENSMUST00000021399 1430 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm3442-201ENSMUST00000216808 710 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm22507-201ENSMUST00000082773 160 ntBASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Cpsf1Q9EPU4 Gm25506-201ENSMUST00000104339 70 ntBASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC1.51□□□□□ -2.17
Cpsf1Q9EPU4 Gm13153-201ENSMUST00000120969 637 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 113.7 ms