Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 9630002D21Rik-202ENSMUST00000222033 2345 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm15263-201ENSMUST00000121556 642 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm22315-201ENSMUST00000158010 143 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm28623-201ENSMUST00000187219 192 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 2500002B13Rik-202ENSMUST00000210752 298 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 AC098718.2-201ENSMUST00000226822 285 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm22741-201ENSMUST00000083438 165 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm25187-201ENSMUST00000083906 133 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm10484-201ENSMUST00000196372 4759 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm37045-201ENSMUST00000192016 2463 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm43327-201ENSMUST00000199285 4055 ntBASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Vmn1r77-203ENSMUST00000227320 8308 ntAPPRIS P2 BASIC4.5□□□□□ -1.69
Trim42Q9D2H5 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 CAAA01194877.1-201ENSMUST00000213137 4233 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm23709-201ENSMUST00000104364 130 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm24774-201ENSMUST00000157384 134 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm23584-201ENSMUST00000157655 129 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm23642-201ENSMUST00000157858 258 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm29454-201ENSMUST00000190805 393 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Mir376a-201ENSMUST00000197584 68 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm45660-201ENSMUST00000210267 151 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm17779-201ENSMUST00000213395 394 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm19256-201ENSMUST00000218550 231 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 AC091783.5-201ENSMUST00000224928 671 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Gm26457-201ENSMUST00000082678 78 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 AC123035.1-201ENSMUST00000213846 2671 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Olfr705-202ENSMUST00000213721 3001 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 AC158805.1-201ENSMUST00000218197 2631 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 CT025577.1-201ENSMUST00000220862 2846 ntBASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 Ccser2-201ENSMUST00000067700 7334 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim42Q9D2H5 9330159F19Rik-202ENSMUST00000213489 2992 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Trav6-7-dv9-201ENSMUST00000103638 379 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm26387-201ENSMUST00000104238 132 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm25824-201ENSMUST00000157092 121 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm22321-201ENSMUST00000157152 104 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm25621-201ENSMUST00000157223 114 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm27245-201ENSMUST00000184385 376 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm44456-201ENSMUST00000196554 89 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm43712-201ENSMUST00000198020 291 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm3143-202ENSMUST00000198364 675 ntTSL 2 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm44402-201ENSMUST00000203677 238 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm7468-201ENSMUST00000203900 652 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm45031-201ENSMUST00000206800 288 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 AC124581.4-201ENSMUST00000225874 463 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 AC115735.2-201ENSMUST00000227135 351 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 AC115291.2-201ENSMUST00000228335 437 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm22062-201ENSMUST00000082563 107 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm23456-201ENSMUST00000083335 137 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 AC156025.1-201ENSMUST00000223597 3551 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Cr2-212ENSMUST00000210219 4227 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim42Q9D2H5 Gm29221-201ENSMUST00000186092 2894 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Vmn2r101-201ENSMUST00000171914 2574 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm11931-201ENSMUST00000121630 447 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm11816-201ENSMUST00000142744 353 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm6265-201ENSMUST00000149263 231 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm23585-201ENSMUST00000157656 102 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm28097-201ENSMUST00000187333 366 ntBASIC4.47□□□□□ -1.69
Trim42Q9D2H5 Gm37601-201ENSMUST00000194922 394 ntBASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 83.1 ms