Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Mir6402-201ENSMUST00000183406 80 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm27698-201ENSMUST00000184060 249 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm27445-201ENSMUST00000184484 72 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Mir195b-201ENSMUST00000184814 97 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm38050-201ENSMUST00000191904 238 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm37616-201ENSMUST00000193974 322 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm44870-201ENSMUST00000207291 357 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm45539-201ENSMUST00000210313 428 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 AC153864.2-201ENSMUST00000220424 292 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 CT485612.4-201ENSMUST00000223405 250 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 AC154506.1-201ENSMUST00000225178 621 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm23454-201ENSMUST00000083332 133 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Mir346-201ENSMUST00000083547 98 ntBASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Ddx56Q9D0R4 Gm45030-201ENSMUST00000207575 1774 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Olfr164-202ENSMUST00000216157 2792 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm25169-201ENSMUST00000104190 129 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm25827-201ENSMUST00000157089 107 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm23435-201ENSMUST00000157183 156 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm22328-201ENSMUST00000158074 112 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm24885-201ENSMUST00000158783 270 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm20656-201ENSMUST00000176925 518 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Vmn1r-ps15-201ENSMUST00000177365 910 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm4479-201ENSMUST00000178807 171 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm28090-201ENSMUST00000189458 664 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm9402-201ENSMUST00000196849 388 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm6615-201ENSMUST00000199426 631 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm45730-201ENSMUST00000212560 395 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 AC130222.1-201ENSMUST00000221198 256 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm22364-201ENSMUST00000083097 98 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Snora31-201ENSMUST00000083213 130 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Olfr1156-201ENSMUST00000099842 1076 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Ddx56Q9D0R4 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm7164-201ENSMUST00000117503 450 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm15282-201ENSMUST00000117707 300 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm23184-201ENSMUST00000122594 131 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm24191-201ENSMUST00000157977 122 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Ighv1-77-201ENSMUST00000170551 294 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm6660-201ENSMUST00000179149 468 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm26914-201ENSMUST00000182262 223 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm29235-201ENSMUST00000185786 442 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm6947-201ENSMUST00000186254 78 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm1833-201ENSMUST00000191608 682 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm44718-201ENSMUST00000206886 359 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 AC133189.2-201ENSMUST00000228527 392 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Olfr822-201ENSMUST00000080460 942 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm25475-201ENSMUST00000082825 180 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Glra2-201ENSMUST00000058787 3150 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Ddx56Q9D0R4 Csmd3-209ENSMUST00000162830 13012 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.81
Ddx56Q9D0R4 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Igkv5-39-201ENSMUST00000103370 287 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm16242-201ENSMUST00000117741 334 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm14352-201ENSMUST00000119250 449 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm14574-201ENSMUST00000120644 279 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm25292-201ENSMUST00000122797 322 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm23586-201ENSMUST00000157657 123 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm23557-201ENSMUST00000157820 138 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm23084-201ENSMUST00000157850 114 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm22789-201ENSMUST00000157884 130 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm23196-201ENSMUST00000158806 107 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm29335-201ENSMUST00000188361 459 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 2210017I01Rik-201ENSMUST00000195278 822 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm37575-201ENSMUST00000195467 309 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm44476-201ENSMUST00000196225 91 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 AC154296.2-201ENSMUST00000214696 545 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 AC124562.1-201ENSMUST00000224673 337 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 AC117202.2-201ENSMUST00000226491 1101 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Gm23727-201ENSMUST00000083352 164 ntBASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Ddx56Q9D0R4 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms