Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm26446-201ENSMUST00000082455 103 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm23297-201ENSMUST00000083184 127 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm15084-201ENSMUST00000178585 1502 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Gm37999-201ENSMUST00000195178 1809 ntBASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
Ddx28Q9CWT6 Olfr878-203ENSMUST00000214263 4003 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Ddx28Q9CWT6 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Ddx28Q9CWT6 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
Ddx28Q9CWT6 Gm37515-201ENSMUST00000193321 3817 ntBASIC2.9□□□□□ -1.94
Ddx28Q9CWT6 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
Ddx28Q9CWT6 Gm38211-201ENSMUST00000192814 7217 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm22834-201ENSMUST00000102021 79 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm14971-201ENSMUST00000117980 663 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm12806-201ENSMUST00000119384 268 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm15807-201ENSMUST00000119880 1128 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Uqcrh-ps2-201ENSMUST00000121613 269 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm8289-201ENSMUST00000144814 1182 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm23332-201ENSMUST00000157424 275 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm22961-201ENSMUST00000157964 106 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm22532-201ENSMUST00000158822 140 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Cfap61-214ENSMUST00000167179 183 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-7-201ENSMUST00000180364 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm28314-201ENSMUST00000191276 345 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm9227-201ENSMUST00000194733 566 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-6-201ENSMUST00000196127 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-12-201ENSMUST00000197274 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-5-201ENSMUST00000197439 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-10-201ENSMUST00000197745 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-11-201ENSMUST00000197952 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-4-201ENSMUST00000198665 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-9-201ENSMUST00000200087 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mir669a-8-201ENSMUST00000200268 87 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm43955-201ENSMUST00000204332 142 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm45860-201ENSMUST00000212700 334 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 AC171203.1-201ENSMUST00000215363 456 ntTSL 5 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 CT009604.2-201ENSMUST00000225531 377 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm25853-201ENSMUST00000082793 132 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 AF357428-201ENSMUST00000083815 69 ntBASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Olfr901-203ENSMUST00000216644 2731 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Ddx28Q9CWT6 Olfr218-203ENSMUST00000216603 3623 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm13510-201ENSMUST00000118659 429 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm11414-201ENSMUST00000121795 263 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm22722-201ENSMUST00000157467 132 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm24720-201ENSMUST00000157518 166 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm22833-201ENSMUST00000158292 132 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm22416-201ENSMUST00000158590 88 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm25119-201ENSMUST00000158815 88 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm8338-201ENSMUST00000163928 363 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm20513-201ENSMUST00000174074 537 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm22853-201ENSMUST00000174974 131 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm21754-201ENSMUST00000177550 479 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm23186-201ENSMUST00000180078 107 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm27921-201ENSMUST00000183968 108 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm28399-201ENSMUST00000186221 318 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm28572-201ENSMUST00000187444 318 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm37029-201ENSMUST00000195773 239 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Igkv5-40-1-201ENSMUST00000196457 359 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm36776-201ENSMUST00000207006 203 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 AC161054.1-201ENSMUST00000214319 184 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm46233-201ENSMUST00000217831 449 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm34408-201ENSMUST00000222104 655 ntTSL 5 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm22970-201ENSMUST00000083304 186 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm26696-201ENSMUST00000181941 2848 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 C87977-201ENSMUST00000105753 2446 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Ddx28Q9CWT6 Gm43663-201ENSMUST00000198643 1505 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm22115-201ENSMUST00000103976 133 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm23923-201ENSMUST00000104108 133 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm13761-201ENSMUST00000117238 807 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm14736-201ENSMUST00000121470 336 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm13424-201ENSMUST00000122301 354 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm14364-201ENSMUST00000129209 267 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm24959-201ENSMUST00000157924 146 ntBASIC2.88□□□□□ -1.95
Ddx28Q9CWT6 Gm22766-201ENSMUST00000158372 99 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms