Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Spata4-201ENSMUST00000033917 1057 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
RTRAFQ9CQE8 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
RTRAFQ9CQE8 Gm24044-201ENSMUST00000083107 156 ntBASIC1.84□□□□□ -2.11
RTRAFQ9CQE8 Gm24610-201ENSMUST00000083270 109 ntBASIC1.84□□□□□ -2.11
RTRAFQ9CQE8 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC1.84□□□□□ -2.11
RTRAFQ9CQE8 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
RTRAFQ9CQE8 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.84□□□□□ -2.12
RTRAFQ9CQE8 Gm17969-201ENSMUST00000185706 2557 ntBASIC1.84□□□□□ -2.12
RTRAFQ9CQE8 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
RTRAFQ9CQE8 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Cyp4b1-ps1-201ENSMUST00000118753 315 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm4732-201ENSMUST00000118778 473 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm6574-201ENSMUST00000120037 362 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm11321-201ENSMUST00000121257 902 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm22452-201ENSMUST00000122804 104 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm2020-201ENSMUST00000145242 579 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm23469-201ENSMUST00000157131 104 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm24138-201ENSMUST00000157572 114 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm25156-201ENSMUST00000179809 79 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm25528-201ENSMUST00000180264 132 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm38044-201ENSMUST00000192964 487 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm18635-201ENSMUST00000199020 1060 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm43264-201ENSMUST00000202284 325 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm44966-201ENSMUST00000208096 157 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 AC115047.1-201ENSMUST00000213795 322 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm46103-201ENSMUST00000217614 341 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Gm23247-201ENSMUST00000083373 107 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Vmn1r132-201ENSMUST00000098736 894 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Zfp936-201ENSMUST00000072829 1368 ntTSL 5 BASIC1.83□□□□□ -2.12
RTRAFQ9CQE8 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Mir673-201ENSMUST00000102361 91 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm22270-201ENSMUST00000104034 132 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm25563-201ENSMUST00000104603 74 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm12656-201ENSMUST00000118149 577 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm12721-201ENSMUST00000120621 268 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm25292-201ENSMUST00000122797 322 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm15205-201ENSMUST00000129329 632 ntTSL 5 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm25621-201ENSMUST00000157223 114 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm24198-201ENSMUST00000157812 108 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm26271-201ENSMUST00000158349 104 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm8580-201ENSMUST00000160295 464 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 4930473D10Rik-201ENSMUST00000161975 487 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm8220-203ENSMUST00000177877 381 ntTSL 5 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Mir6382-201ENSMUST00000184055 110 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm27753-201ENSMUST00000184742 203 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm43804-201ENSMUST00000198280 456 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm44324-201ENSMUST00000198517 135 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 AC105958.2-201ENSMUST00000214167 191 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 AC153529.1-201ENSMUST00000217818 370 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 AC159621.1-201ENSMUST00000223249 163 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 CT009733.1-203ENSMUST00000224033 451 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Olfr1454-201ENSMUST00000073732 924 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm23615-201ENSMUST00000082602 65 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Gm5670-201ENSMUST00000093546 372 ntBASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Olfr847-202ENSMUST00000216839 2385 ntAPPRIS P1 TSL 3 BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
RTRAFQ9CQE8 AC162910.1-201ENSMUST00000221219 1723 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm25088-201ENSMUST00000101803 79 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm24670-201ENSMUST00000104154 132 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm12636-201ENSMUST00000117395 624 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm14868-201ENSMUST00000117840 216 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm13876-201ENSMUST00000118451 261 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm23118-201ENSMUST00000122657 187 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm25220-201ENSMUST00000157546 95 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm25427-201ENSMUST00000157605 103 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm26041-201ENSMUST00000158148 108 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm24553-201ENSMUST00000158653 131 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm17187-201ENSMUST00000164622 410 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm17054-201ENSMUST00000169811 259 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm14435-203ENSMUST00000172025 192 ntTSL 5 BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm22131-201ENSMUST00000178415 94 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm4076-201ENSMUST00000179230 965 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm36966-201ENSMUST00000192217 413 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm37743-201ENSMUST00000194645 376 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm7871-201ENSMUST00000195346 618 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm42805-201ENSMUST00000196158 276 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Igkv1-136-201ENSMUST00000200635 297 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm10297-201ENSMUST00000207136 651 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 Gm46146-201ENSMUST00000217483 346 ntBASIC1.81□□□□□ -2.12
RTRAFQ9CQE8 CT030166.2-201ENSMUST00000222021 368 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms