Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gm38088-201ENSMUST00000195829 241 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 1700126H18Rik-201ENSMUST00000201903 405 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Gm45815-201ENSMUST00000220241 146 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 AC118006.1-201ENSMUST00000224211 501 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Gm22304-201ENSMUST00000082688 129 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Gm23443-201ENSMUST00000082916 128 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Gm22868-201ENSMUST00000083955 164 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Olfr681-201ENSMUST00000098157 948 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Olfr1105-202ENSMUST00000215978 3012 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
H1fooQ8VIK3 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.89
H1fooQ8VIK3 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.21□□□□□ -1.89
H1fooQ8VIK3 Gm37661-201ENSMUST00000191863 1550 ntBASIC3.21□□□□□ -1.89
H1fooQ8VIK3 Mir701-201ENSMUST00000102208 109 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Igkv9-129-201ENSMUST00000103308 350 ntAPPRIS ALT2 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Trdv5-201ENSMUST00000103685 438 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm13876-201ENSMUST00000118451 261 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm12252-201ENSMUST00000119517 219 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm11606-201ENSMUST00000120706 617 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm16327-201ENSMUST00000137146 228 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm24504-201ENSMUST00000157679 100 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm24014-201ENSMUST00000157728 157 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm25397-201ENSMUST00000176951 92 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm20673-201ENSMUST00000177167 430 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm21978-201ENSMUST00000179696 377 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm25284-201ENSMUST00000180345 141 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm19252-201ENSMUST00000204705 305 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm18015-201ENSMUST00000214879 316 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 AC162934.1-201ENSMUST00000222880 309 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 AC113031.4-201ENSMUST00000228381 514 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 AC165284.1-201ENSMUST00000228614 458 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Wac-217ENSMUST00000172018 1965 ntTSL 5 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Btbd35f5-201ENSMUST00000179538 1950 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Olfr986-202ENSMUST00000214763 3274 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 AC124572.2-201ENSMUST00000218041 5152 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
H1fooQ8VIK3 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Mir551b-201ENSMUST00000102165 98 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Snord66-201ENSMUST00000104051 75 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm11322-201ENSMUST00000118095 435 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm11798-201ENSMUST00000119150 421 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm15029-201ENSMUST00000119742 199 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm14877-201ENSMUST00000119803 478 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm12884-201ENSMUST00000120371 325 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm14810-201ENSMUST00000121628 486 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm11403-201ENSMUST00000122195 369 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm22073-201ENSMUST00000122668 189 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm27926-201ENSMUST00000157180 66 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm22219-201ENSMUST00000157562 319 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm24503-201ENSMUST00000158454 135 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm25369-201ENSMUST00000158848 132 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm6625-201ENSMUST00000177870 272 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm26866-201ENSMUST00000180414 802 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Mir6414-201ENSMUST00000183685 82 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm27921-201ENSMUST00000183968 108 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Mir6899-201ENSMUST00000184798 64 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 4930533P14Rik-201ENSMUST00000189056 583 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm28267-201ENSMUST00000191093 265 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm28179-203ENSMUST00000191382 544 ntTSL 5 BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm30280-201ENSMUST00000192214 262 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm38361-201ENSMUST00000193419 458 ntTSL 5 BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm43406-201ENSMUST00000200356 334 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm44654-201ENSMUST00000208052 329 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm45162-201ENSMUST00000209013 618 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm45315-201ENSMUST00000209283 333 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm5358-201ENSMUST00000212814 353 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 AC166341.3-201ENSMUST00000221861 114 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Rps15a-ps1-201ENSMUST00000071120 393 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Mir133a-2-201ENSMUST00000083526 104 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm23851-201ENSMUST00000083831 103 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Gm25937-201ENSMUST00000083912 107 ntBASIC3.2□□□□□ -1.9
H1fooQ8VIK3 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 93.4 ms