Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm22814-201ENSMUST00000157452 104 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm26414-201ENSMUST00000157674 269 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm23258-201ENSMUST00000158319 106 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Mir6338-201ENSMUST00000183389 109 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm9402-201ENSMUST00000196849 388 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Igkv15-102-201ENSMUST00000197885 287 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm43604-201ENSMUST00000199799 705 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 AC074315.1-201ENSMUST00000228801 214 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Ccl5-201ENSMUST00000035938 532 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 n-R5s85-201ENSMUST00000083453 113 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.71□□□□□ -1.82
Clrn1Q8K445 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Clrn1Q8K445 Gm43594-201ENSMUST00000201153 3442 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 AC154548.1-201ENSMUST00000225844 3838 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm22269-201ENSMUST00000104002 130 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm13852-201ENSMUST00000122350 242 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm23752-201ENSMUST00000157584 115 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm23781-201ENSMUST00000157940 308 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm24850-201ENSMUST00000158029 119 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm24503-201ENSMUST00000158454 135 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm7241-201ENSMUST00000159853 357 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Scgb3a2-203ENSMUST00000189750 578 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm37746-201ENSMUST00000193249 198 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm6135-201ENSMUST00000198726 372 ntTSL 2 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm45150-201ENSMUST00000206051 467 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm44844-201ENSMUST00000207242 336 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm6240-201ENSMUST00000208014 473 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm45513-201ENSMUST00000210228 376 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 AC152062.1-201ENSMUST00000218129 386 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 AC165157.3-201ENSMUST00000220815 103 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm26066-201ENSMUST00000083385 109 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm26329-201ENSMUST00000093723 110 ntBASIC3.7□□□□□ -1.82
Clrn1Q8K445 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Senp8-201ENSMUST00000051039 3682 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Jrkl-201ENSMUST00000110582 3223 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Cd200r3-209ENSMUST00000166731 3876 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Clrn1Q8K445 Gm38073-201ENSMUST00000195141 3665 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Enam-202ENSMUST00000199104 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Olfr113-201ENSMUST00000216181 1671 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm4788-203ENSMUST00000111989 3187 ntAPPRIS P2 TSL 1 (best) BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Trbj1-4-201ENSMUST00000103287 51 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm11566-201ENSMUST00000118550 203 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm14541-201ENSMUST00000118985 157 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm14119-201ENSMUST00000119511 235 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Rpl31-ps6-201ENSMUST00000119959 378 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm23759-201ENSMUST00000158351 268 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm23198-201ENSMUST00000158811 91 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm17187-201ENSMUST00000164622 410 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Rpl26-ps4-201ENSMUST00000170279 438 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm26844-201ENSMUST00000181690 673 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm28924-201ENSMUST00000190012 241 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm29334-201ENSMUST00000190334 357 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Trbv11-201ENSMUST00000194354 260 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm37801-201ENSMUST00000194754 274 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm44030-201ENSMUST00000204865 432 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Klk1b18-ps-201ENSMUST00000205780 167 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm38944-201ENSMUST00000208218 512 ntTSL 2 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 AC164304.1-201ENSMUST00000226920 272 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm22571-201ENSMUST00000082984 70 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Gm25200-201ENSMUST00000083094 130 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Mir346-201ENSMUST00000083547 98 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.69□□□□□ -1.82
Clrn1Q8K445 Mgat4e-202ENSMUST00000172898 1735 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.69□□□□□ -1.82
Clrn1Q8K445 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Olfr186-202ENSMUST00000206463 2208 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm24338-201ENSMUST00000104205 127 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm15783-201ENSMUST00000117521 633 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm23184-201ENSMUST00000122594 131 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm22613-201ENSMUST00000122679 292 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm16354-201ENSMUST00000155376 150 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm23956-201ENSMUST00000157211 119 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm24909-201ENSMUST00000157290 280 ntBASIC3.68□□□□□ -1.82
Clrn1Q8K445 Gm22816-201ENSMUST00000157450 117 ntBASIC3.68□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms