Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25813-201ENSMUST00000082748 191 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Prl6a1-202ENSMUST00000091680 868 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Gm37761-201ENSMUST00000194989 2098 ntBASIC1.87□□□□□ -2.11
Ccdc28aQ8CEI3 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm15497-201ENSMUST00000119137 551 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm13147-202ENSMUST00000177526 1173 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm9892-201ENSMUST00000182415 992 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Mir7678-201ENSMUST00000185076 71 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm29263-201ENSMUST00000188718 463 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm28384-201ENSMUST00000189079 463 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm18964-201ENSMUST00000193013 563 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44041-201ENSMUST00000203678 396 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44585-201ENSMUST00000207150 607 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm18598-201ENSMUST00000207724 597 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm26206-201ENSMUST00000082908 110 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm13212-201ENSMUST00000097794 1221 ntTSL 5 BASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.86□□□□□ -2.11
Ccdc28aQ8CEI3 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm649-201ENSMUST00000117284 1054 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm22718-201ENSMUST00000122701 315 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25666-201ENSMUST00000157702 107 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm22386-201ENSMUST00000158192 129 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25120-201ENSMUST00000180148 79 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm24969-201ENSMUST00000180331 79 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm26713-201ENSMUST00000181827 627 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Mir6993-201ENSMUST00000184912 65 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm37692-201ENSMUST00000192633 232 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm20948-201ENSMUST00000211091 449 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm18000-201ENSMUST00000212153 800 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Fcf1-201ENSMUST00000021669 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm7214-201ENSMUST00000222428 272 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Pmch-201ENSMUST00000048621 749 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Gm10038-201ENSMUST00000077233 441 ntBASIC1.85□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm11490-201ENSMUST00000118128 272 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm9001-201ENSMUST00000121642 399 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm12071-201ENSMUST00000121968 469 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm22666-201ENSMUST00000158717 164 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm25996-201ENSMUST00000175393 117 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm43978-201ENSMUST00000203491 451 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr165-203ENSMUST00000206410 1040 ntAPPRIS P2 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm44656-201ENSMUST00000208428 490 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 AC133076.1-201ENSMUST00000228074 484 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr165-201ENSMUST00000052516 1040 ntAPPRIS ALT1 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Mir222-201ENSMUST00000083537 79 ntBASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Ccdc28aQ8CEI3 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
Ccdc28aQ8CEI3 AC153881.3-201ENSMUST00000218494 1561 ntBASIC1.84□□□□□ -2.12
Ccdc28aQ8CEI3 Gm43046-201ENSMUST00000198771 2451 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Trbv3-201ENSMUST00000103264 455 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm13331-201ENSMUST00000117500 448 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm12872-201ENSMUST00000121835 320 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm16004-201ENSMUST00000161981 311 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm20656-201ENSMUST00000176925 518 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 1700044K03Rik-201ENSMUST00000190201 377 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm29389-201ENSMUST00000191562 352 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm7871-201ENSMUST00000195346 618 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm43286-201ENSMUST00000197420 424 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm42665-201ENSMUST00000202100 586 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm45438-201ENSMUST00000210242 564 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm21089-201ENSMUST00000215843 325 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Gm45393-201ENSMUST00000211634 2631 ntBASIC1.83□□□□□ -2.12
Ccdc28aQ8CEI3 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm15084-201ENSMUST00000178585 1502 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Defa-ps1-201ENSMUST00000119062 282 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm12881-201ENSMUST00000121191 203 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm11384-201ENSMUST00000121376 303 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm23885-201ENSMUST00000122682 294 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm15274-201ENSMUST00000131442 291 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm21979-201ENSMUST00000139887 291 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm15259-201ENSMUST00000151262 291 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm22891-201ENSMUST00000158641 164 ntBASIC1.82□□□□□ -2.12
Ccdc28aQ8CEI3 Gm22257-201ENSMUST00000158687 301 ntBASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms