Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Gm42684-201ENSMUST00000197663 3615 ntBASIC2.86□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm22834-201ENSMUST00000102021 79 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm24590-201ENSMUST00000116699 119 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm26473-201ENSMUST00000116763 127 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm12427-201ENSMUST00000117719 302 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm8217-201ENSMUST00000119136 465 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm15231-201ENSMUST00000119174 447 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm16411-201ENSMUST00000122164 1100 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm24784-201ENSMUST00000157640 62 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm24439-201ENSMUST00000157894 117 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21842-201ENSMUST00000177552 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21626-201ENSMUST00000177791 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21562-201ENSMUST00000177888 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21539-201ENSMUST00000177925 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17522-201ENSMUST00000178144 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21599-201ENSMUST00000178249 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21914-201ENSMUST00000178452 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21723-201ENSMUST00000178692 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21916-201ENSMUST00000178771 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21801-201ENSMUST00000178865 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21633-201ENSMUST00000178941 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21821-201ENSMUST00000179646 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21588-201ENSMUST00000180074 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm22917-201ENSMUST00000180116 110 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21780-201ENSMUST00000180128 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21572-201ENSMUST00000180134 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm21529-201ENSMUST00000180175 498 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm29104-201ENSMUST00000186304 222 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm29370-202ENSMUST00000187476 499 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm28090-201ENSMUST00000189458 664 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm45387-201ENSMUST00000209792 632 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr936-202ENSMUST00000216912 937 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 AC153361.2-201ENSMUST00000218188 481 ntTSL 5 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 CT030705.1-201ENSMUST00000223971 533 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Ccdc28bQ8CEG5 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Zfp62-212ENSMUST00000180016 3964 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Mir499-201ENSMUST00000102357 79 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm42606-201ENSMUST00000114209 239 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm14197-201ENSMUST00000117480 1049 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Rhox11-ps2-201ENSMUST00000117962 451 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm14594-201ENSMUST00000118052 537 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm11285-201ENSMUST00000118443 322 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm14590-201ENSMUST00000118934 537 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm25434-201ENSMUST00000158278 167 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm25835-201ENSMUST00000158917 144 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm20672-201ENSMUST00000176605 261 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm26297-201ENSMUST00000179464 132 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Tmsb15b2-202ENSMUST00000180194 243 ntAPPRIS P1 TSL 3 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm14596-201ENSMUST00000180268 537 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm14595-201ENSMUST00000180335 537 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Mir7093-201ENSMUST00000184195 101 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Mir6363-201ENSMUST00000184880 114 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm6651-201ENSMUST00000189471 271 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm18291-201ENSMUST00000190791 301 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm19498-201ENSMUST00000191128 331 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr662-ps1-201ENSMUST00000210704 396 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 AC173115.1-201ENSMUST00000220835 211 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 n-R5s85-201ENSMUST00000083453 113 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Mir27a-201ENSMUST00000083510 87 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Olfr968-202ENSMUST00000216458 4630 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.84□□□□□ -1.95
Ccdc28bQ8CEG5 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.84□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr347-202ENSMUST00000216882 3385 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.96
Ccdc28bQ8CEG5 Gm37320-201ENSMUST00000192781 4953 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm13331-201ENSMUST00000117500 448 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm2066-201ENSMUST00000118046 389 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm7071-201ENSMUST00000120458 462 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm14841-201ENSMUST00000121067 758 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm11819-201ENSMUST00000122192 372 ntBASIC2.83□□□□□ -1.96
Ccdc28bQ8CEG5 Gm26020-201ENSMUST00000122729 183 ntBASIC2.83□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms