Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm14825-201ENSMUST00000113538 701 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm7123-201ENSMUST00000117647 213 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm12025-201ENSMUST00000117768 144 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm12722-201ENSMUST00000118507 493 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm14307-201ENSMUST00000118930 291 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25107-201ENSMUST00000122472 129 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24839-201ENSMUST00000122602 107 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm14297-201ENSMUST00000129110 291 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm14684-201ENSMUST00000145722 123 ntTSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm22034-201ENSMUST00000157283 134 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25339-201ENSMUST00000157458 232 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26414-201ENSMUST00000157674 269 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm23865-201ENSMUST00000157723 97 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24857-201ENSMUST00000158061 310 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24577-201ENSMUST00000158580 63 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Mir5099-201ENSMUST00000175257 74 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm10717-205ENSMUST00000177601 645 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26502-201ENSMUST00000177732 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25350-201ENSMUST00000177849 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm23446-201ENSMUST00000177977 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26201-201ENSMUST00000178047 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24711-201ENSMUST00000178062 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24609-201ENSMUST00000178166 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm23265-201ENSMUST00000178321 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm22812-201ENSMUST00000178329 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26246-201ENSMUST00000178388 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25155-201ENSMUST00000178450 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24760-201ENSMUST00000178530 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm22285-201ENSMUST00000178576 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm22417-201ENSMUST00000178656 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26270-201ENSMUST00000178690 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm23313-201ENSMUST00000178931 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm23089-201ENSMUST00000178947 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm24153-201ENSMUST00000179280 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25597-201ENSMUST00000179388 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm25816-201ENSMUST00000179764 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26188-201ENSMUST00000179963 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm26433-201ENSMUST00000180227 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm22128-201ENSMUST00000180346 94 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm43115-201ENSMUST00000196244 160 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm44520-201ENSMUST00000205447 802 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Olfr337-ps1-202ENSMUST00000213375 526 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 AC115750.1-201ENSMUST00000220441 567 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Slco6c1-202ENSMUST00000189547 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Tfpi-203ENSMUST00000111711 3968 ntTSL 5 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
Ubfd1Q78JW9 Gm37672-201ENSMUST00000192682 4014 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 n-R5s31-201ENSMUST00000104162 110 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm11939-201ENSMUST00000104931 300 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm14013-201ENSMUST00000119006 270 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm14287-201ENSMUST00000121060 117 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm13943-201ENSMUST00000144043 343 ntTSL 5 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm23168-201ENSMUST00000157156 143 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm23592-201ENSMUST00000157859 117 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm24086-201ENSMUST00000175171 98 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm24811-201ENSMUST00000175313 100 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm24862-201ENSMUST00000179103 79 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm23310-201ENSMUST00000179105 79 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm25461-201ENSMUST00000179293 79 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm29352-201ENSMUST00000188054 544 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm44927-201ENSMUST00000207573 716 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm2436-201ENSMUST00000219562 774 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm4987-201ENSMUST00000078326 408 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm22245-201ENSMUST00000082479 103 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 Gm26111-201ENSMUST00000083969 106 ntBASIC3.41□□□□□ -1.86
Ubfd1Q78JW9 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms