Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC3.96□□□□□ -1.77
Ddx55Q6ZPL9 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm13510-201ENSMUST00000118659 429 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm14581-201ENSMUST00000121726 198 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm15986-201ENSMUST00000122153 400 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm8840-201ENSMUST00000122454 386 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm16155-201ENSMUST00000155180 338 ntTSL 3 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm25967-201ENSMUST00000157168 147 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm24409-201ENSMUST00000157881 152 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm23257-201ENSMUST00000158322 132 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm24577-201ENSMUST00000158580 63 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm24168-201ENSMUST00000178825 107 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm28920-201ENSMUST00000189957 699 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm29192-201ENSMUST00000190942 377 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm18384-201ENSMUST00000195974 808 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Igkv2-113-201ENSMUST00000196138 362 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm44654-201ENSMUST00000208052 329 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm39147-201ENSMUST00000211376 465 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Gm45814-201ENSMUST00000212646 775 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 AC154521.1-201ENSMUST00000222635 330 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 AC154276.2-201ENSMUST00000227707 309 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 AC153150.1-201ENSMUST00000226065 3782 ntBASIC3.96□□□□□ -1.78
Ddx55Q6ZPL9 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm12803-201ENSMUST00000118907 821 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm15760-201ENSMUST00000119553 283 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 4930421P07Rik-201ENSMUST00000147322 399 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm22038-201ENSMUST00000157277 242 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm23123-201ENSMUST00000157648 144 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm3027-201ENSMUST00000167579 451 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm20534-201ENSMUST00000172957 172 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm29231-201ENSMUST00000179850 319 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm27608-201ENSMUST00000184822 162 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 AC108416.2-201ENSMUST00000226792 367 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Olfr1033-204ENSMUST00000215682 3625 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm44821-201ENSMUST00000208212 2002 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Slc22a30-203ENSMUST00000120540 2598 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm15975-201ENSMUST00000122385 1402 ntBASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
Ddx55Q6ZPL9 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Olfr392-201ENSMUST00000118463 3643 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Olfr902-202ENSMUST00000213105 2113 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Nlrp4d-201ENSMUST00000182420 2946 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm13711-201ENSMUST00000119708 453 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm11917-201ENSMUST00000154813 373 ntTSL 2 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm25341-201ENSMUST00000157461 268 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm24552-201ENSMUST00000158646 103 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Ear10-201ENSMUST00000159175 678 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm21978-201ENSMUST00000179696 377 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm26866-201ENSMUST00000180414 802 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm9022-202ENSMUST00000183285 483 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm37431-201ENSMUST00000195102 111 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm26129-201ENSMUST00000082719 107 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
Ddx55Q6ZPL9 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm15190-201ENSMUST00000120855 276 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm11384-201ENSMUST00000121376 303 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm12779-201ENSMUST00000121496 143 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm22216-201ENSMUST00000157557 114 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Mir6338-201ENSMUST00000183389 109 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm28030-201ENSMUST00000184987 138 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Gm45344-201ENSMUST00000211610 341 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 AC122905.2-201ENSMUST00000220325 269 ntBASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Vmn1r14-205ENSMUST00000227884 7542 ntAPPRIS P2 BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
Ddx55Q6ZPL9 Olfr1309-203ENSMUST00000214935 5448 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms