Protein–RNA interactions for Protein: Q6PGB8

Smarca1, Probable global transcription activator SNF2L1, mousemouse

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1Q6PGB8 Gm12806-201ENSMUST00000119384 268 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm24213-201ENSMUST00000158255 258 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm28399-201ENSMUST00000186221 318 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm28572-201ENSMUST00000187444 318 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm9236-201ENSMUST00000196892 587 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 AC127371.1-202ENSMUST00000228923 306 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Gm22979-201ENSMUST00000082609 159 ntBASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
Smarca1Q6PGB8 A230004M16Rik-202ENSMUST00000139508 4468 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Vmn2r78-201ENSMUST00000170835 2611 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Fam111a-203ENSMUST00000144662 3912 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm12386-201ENSMUST00000117380 688 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm14558-201ENSMUST00000117458 381 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm12697-201ENSMUST00000118008 667 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm14119-201ENSMUST00000119511 235 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm14638-201ENSMUST00000121338 216 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm23704-201ENSMUST00000158844 340 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Mir6371-201ENSMUST00000184470 111 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm27490-201ENSMUST00000184754 128 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm29429-201ENSMUST00000187071 121 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm42622-201ENSMUST00000197229 355 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm44142-201ENSMUST00000203358 311 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 AC069561.2-201ENSMUST00000217596 420 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm18774-201ENSMUST00000218269 601 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Gm9370-201ENSMUST00000222787 609 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Olfr1095-201ENSMUST00000099874 927 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Smarca1Q6PGB8 Olfr796-202ENSMUST00000214584 3554 ntAPPRIS P1 TSL 2 BASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm22831-201ENSMUST00000102473 109 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm25539-201ENSMUST00000116886 122 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm13085-201ENSMUST00000118356 171 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm26477-201ENSMUST00000122617 323 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm26275-201ENSMUST00000157101 268 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm22038-201ENSMUST00000157277 242 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm26335-201ENSMUST00000178449 107 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm27869-201ENSMUST00000184327 122 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm37281-201ENSMUST00000192412 439 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm42818-201ENSMUST00000198869 987 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Gm19140-201ENSMUST00000209790 421 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 CT025526.1-201ENSMUST00000217327 267 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 AC162857.1-201ENSMUST00000226614 400 ntBASIC3.47□□□□□ -1.85
Smarca1Q6PGB8 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.85
Smarca1Q6PGB8 Gm44715-201ENSMUST00000209049 3839 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Mir291a-201ENSMUST00000104815 82 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm14392-201ENSMUST00000120332 401 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm14413-201ENSMUST00000122158 408 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm15733-201ENSMUST00000132957 242 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm22560-201ENSMUST00000157332 120 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm3104-201ENSMUST00000171004 473 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm26061-201ENSMUST00000175584 108 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm20688-201ENSMUST00000176779 512 ntTSL 5 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm21776-201ENSMUST00000177676 1083 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm8532-201ENSMUST00000179174 461 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm27893-201ENSMUST00000184408 194 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm30674-201ENSMUST00000214523 392 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm18696-201ENSMUST00000220103 274 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm43715-201ENSMUST00000196307 2715 ntBASIC3.46□□□□□ -1.86
Smarca1Q6PGB8 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.45□□□□□ -1.86
Smarca1Q6PGB8 Olfr142-202ENSMUST00000213968 3630 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Smarca1Q6PGB8 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms