Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Gm26188-201ENSMUST00000179963 94 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm26433-201ENSMUST00000180227 94 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Snord116l11-201ENSMUST00000180312 94 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm22128-201ENSMUST00000180346 94 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm27028-201ENSMUST00000182303 399 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm27317-201ENSMUST00000183533 95 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm29413-201ENSMUST00000186019 880 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm29639-201ENSMUST00000188375 580 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm28779-201ENSMUST00000189678 323 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm37771-201ENSMUST00000193121 265 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm43415-201ENSMUST00000201934 750 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm45587-201ENSMUST00000211548 765 ntTSL 5 BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm45814-201ENSMUST00000212646 775 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 AC167669.1-201ENSMUST00000224932 384 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Gm11228-201ENSMUST00000143796 2013 ntTSL 1 (best) BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Olfr835-202ENSMUST00000213018 2690 ntAPPRIS P1 TSL 5 BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Rictor-201ENSMUST00000061656 9312 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Snrnp40Q6PE01 Olfr1402-202ENSMUST00000199297 4051 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr105-ps-202ENSMUST00000215518 3778 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm15697-201ENSMUST00000121946 2902 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm36944-201ENSMUST00000192257 2759 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm12370-201ENSMUST00000117809 604 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm12878-201ENSMUST00000118744 332 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm14069-201ENSMUST00000120815 229 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm12155-201ENSMUST00000121267 160 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm9225-201ENSMUST00000121921 836 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm11229-201ENSMUST00000121993 437 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm14768-201ENSMUST00000122126 678 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm22011-201ENSMUST00000158790 123 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm26871-205ENSMUST00000181926 742 ntTSL 3 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm27957-201ENSMUST00000184054 127 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm27445-201ENSMUST00000184484 72 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm28141-201ENSMUST00000186676 342 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm10193-201ENSMUST00000188288 231 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Mir7118-201ENSMUST00000197760 61 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm43746-201ENSMUST00000200028 317 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm43550-201ENSMUST00000200597 303 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr966-ps1-201ENSMUST00000214875 577 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 AC122418.1-201ENSMUST00000225012 511 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Tbx22-201ENSMUST00000068451 2947 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Vmn1r71-208ENSMUST00000228374 3717 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Snrnp40Q6PE01 Depdc1a-201ENSMUST00000029825 2920 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm37598-201ENSMUST00000194506 1301 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm13329-201ENSMUST00000117063 265 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm2066-201ENSMUST00000118046 389 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm14159-201ENSMUST00000119832 451 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm7916-201ENSMUST00000120325 456 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm11582-201ENSMUST00000121041 236 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm13210-201ENSMUST00000121483 273 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm15065-201ENSMUST00000121699 273 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm23206-201ENSMUST00000122720 184 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm25624-201ENSMUST00000157222 275 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm25220-201ENSMUST00000157546 95 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm24757-201ENSMUST00000176987 371 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm20651-201ENSMUST00000177219 329 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm21754-201ENSMUST00000177550 479 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Snord116l14-201ENSMUST00000179875 94 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Mir6402-201ENSMUST00000183406 80 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm8392-201ENSMUST00000185647 835 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm29429-201ENSMUST00000187071 121 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm28211-201ENSMUST00000190920 315 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm8041-201ENSMUST00000199755 616 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm45395-201ENSMUST00000209891 559 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm45772-201ENSMUST00000212961 240 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 Gm8125-201ENSMUST00000216602 738 ntBASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC2.79□□□□□ -1.96
Snrnp40Q6PE01 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.79□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 132.4 ms