Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm13249-201ENSMUST00000177803 345 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm13144-201ENSMUST00000179385 345 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm27445-201ENSMUST00000184484 72 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 AV026068-203ENSMUST00000185946 668 ntTSL 3 BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm28534-201ENSMUST00000187744 676 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gtpbp4-ps6-201ENSMUST00000198160 292 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm43415-201ENSMUST00000201934 750 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm44757-201ENSMUST00000206373 157 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm7948-201ENSMUST00000212607 844 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Mecom-201ENSMUST00000061088 348 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Pip-201ENSMUST00000075351 588 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 n-R5s7-201ENSMUST00000083755 121 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Gm26166-201ENSMUST00000083788 107 ntBASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Olfr1500-204ENSMUST00000215760 2305 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Wnk3-205ENSMUST00000184392 5394 ntAPPRIS P4 TSL 1 (best) BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Iigp1-201ENSMUST00000032473 3121 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
Rnf220Q6PDX6 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Olfr1277-202ENSMUST00000214760 5944 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Zfp493-201ENSMUST00000164936 3258 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm20557-201ENSMUST00000192871 2794 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm37011-201ENSMUST00000195543 2935 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Rpl35-ps1-201ENSMUST00000118070 372 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm13717-201ENSMUST00000119868 365 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm23120-201ENSMUST00000157654 287 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm23196-201ENSMUST00000158806 107 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 4930518C09Rik-201ENSMUST00000172700 478 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Mir5624-201ENSMUST00000176635 61 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Rpl31-ps24-201ENSMUST00000181350 379 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm26979-201ENSMUST00000182971 217 ntTSL 3 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Mir6346-201ENSMUST00000183982 81 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm28000-201ENSMUST00000184380 85 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm38238-201ENSMUST00000194334 346 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm37290-201ENSMUST00000195775 339 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm43649-201ENSMUST00000196596 391 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Olfr436-ps1-201ENSMUST00000203108 284 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm44844-201ENSMUST00000207242 336 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm25856-201ENSMUST00000082786 75 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm650-201ENSMUST00000144428 1551 ntBASIC3.67□□□□□ -1.82
Rnf220Q6PDX6 Gm9747-201ENSMUST00000023262 2822 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Mkln1-201ENSMUST00000026699 11395 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Zfp846-201ENSMUST00000060063 1626 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Olfr729-202ENSMUST00000213163 4283 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Rgs13-201ENSMUST00000052375 1510 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm37777-201ENSMUST00000195546 3366 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm12427-201ENSMUST00000117719 302 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm14037-201ENSMUST00000120576 313 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm24481-201ENSMUST00000157210 102 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm22560-201ENSMUST00000157332 120 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm25603-201ENSMUST00000158361 105 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm23579-201ENSMUST00000158528 103 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm25162-201ENSMUST00000158906 159 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Mir5112-201ENSMUST00000174897 60 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm26585-201ENSMUST00000180890 630 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm9238-201ENSMUST00000196181 329 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm35702-201ENSMUST00000198653 511 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm18429-201ENSMUST00000198707 421 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm42594-201ENSMUST00000199511 246 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm17887-201ENSMUST00000200194 547 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Igkv2-95-1-201ENSMUST00000200279 272 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm6051-201ENSMUST00000201529 352 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm44989-201ENSMUST00000204749 217 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm45368-202ENSMUST00000210944 416 ntTSL 5 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm30674-201ENSMUST00000214523 392 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm22806-201ENSMUST00000082738 136 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm22353-201ENSMUST00000083918 136 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 n-R5s151-201ENSMUST00000083959 119 ntBASIC3.66□□□□□ -1.82
Rnf220Q6PDX6 Gm5596-201ENSMUST00000207988 2421 ntBASIC3.65□□□□□ -1.82
Rnf220Q6PDX6 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.65□□□□□ -1.82
Rnf220Q6PDX6 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm22779-201ENSMUST00000104085 107 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm24835-201ENSMUST00000116777 111 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm12071-201ENSMUST00000121968 469 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm16218-201ENSMUST00000155424 388 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm25908-201ENSMUST00000157624 98 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm24847-201ENSMUST00000158032 108 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Vmn1r126-201ENSMUST00000168398 966 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm27869-201ENSMUST00000184327 122 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Gm28995-201ENSMUST00000186625 261 ntBASIC3.65□□□□□ -1.83
Rnf220Q6PDX6 Scgb2b29-ps-201ENSMUST00000187539 331 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 90.8 ms