Protein–RNA interactions for Protein: Q6PDM4

Ccdc36, Interactor of HORMAD1 protein 1, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc36Q6PDM4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm17522-201ENSMUST00000178144 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21599-201ENSMUST00000178249 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21914-201ENSMUST00000178452 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21723-201ENSMUST00000178692 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21916-201ENSMUST00000178771 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21801-201ENSMUST00000178865 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21633-201ENSMUST00000178941 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21821-201ENSMUST00000179646 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21588-201ENSMUST00000180074 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21780-201ENSMUST00000180128 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21572-201ENSMUST00000180134 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21529-201ENSMUST00000180175 498 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Ranbp2-ps4-201ENSMUST00000183481 385 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm29370-202ENSMUST00000187476 499 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm19147-201ENSMUST00000199622 652 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm45049-201ENSMUST00000207586 591 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm46124-201ENSMUST00000215223 808 ntTSL 5 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 AC116589.1-201ENSMUST00000220634 327 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 AC122924.2-201ENSMUST00000220799 298 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 AC160930.1-201ENSMUST00000227194 337 ntBASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Sval3-201ENSMUST00000080742 550 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Olfr623-202ENSMUST00000213840 3980 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
Ccdc36Q6PDM4 Gm37630-201ENSMUST00000194210 1456 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Mir542-201ENSMUST00000102186 85 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm22023-201ENSMUST00000104354 130 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm14602-201ENSMUST00000118625 340 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm14915-201ENSMUST00000120747 204 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm22199-201ENSMUST00000122660 126 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm2020-201ENSMUST00000145242 579 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm13324-201ENSMUST00000148607 569 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm26101-201ENSMUST00000157246 105 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm23588-201ENSMUST00000157659 99 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm22841-201ENSMUST00000158443 62 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm23860-201ENSMUST00000179446 132 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm43884-201ENSMUST00000204251 559 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm44754-201ENSMUST00000208155 400 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm45438-201ENSMUST00000210242 564 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 CT025526.1-201ENSMUST00000217327 267 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 AC157570.3-201ENSMUST00000219281 205 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 AC131029.2-202ENSMUST00000228430 496 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Vmn1r184-201ENSMUST00000057123 945 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm25199-201ENSMUST00000083095 104 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Ccdc36Q6PDM4 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Ifi203-201ENSMUST00000042228 3754 ntAPPRIS ALT2 TSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm24376-201ENSMUST00000104399 127 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm13239-201ENSMUST00000119920 637 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm23380-201ENSMUST00000158448 103 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm25194-201ENSMUST00000177987 79 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm25670-201ENSMUST00000178423 107 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm26239-201ENSMUST00000178842 107 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm24267-201ENSMUST00000179841 107 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Mir6338-201ENSMUST00000183389 109 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Mir7578-201ENSMUST00000183455 82 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm29045-201ENSMUST00000187278 698 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm28647-201ENSMUST00000188416 197 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm19694-201ENSMUST00000192364 505 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm18703-201ENSMUST00000215318 333 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 Gm3442-201ENSMUST00000216808 710 ntBASIC2.34□□□□□ -2.03
Ccdc36Q6PDM4 CT030159.4-201ENSMUST00000221966 395 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 76,532 protein–RNA pairs in 95.5 ms