Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Mir5129-201ENSMUST00000174938 78 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Ang-ps3-201ENSMUST00000177964 433 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Pnrc2-203ENSMUST00000180300 171 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm27834-201ENSMUST00000183427 125 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm6947-201ENSMUST00000186254 78 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm28629-201ENSMUST00000187309 263 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm19498-201ENSMUST00000191128 331 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm37698-201ENSMUST00000192605 463 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm37616-201ENSMUST00000193974 322 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm43510-201ENSMUST00000197922 353 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 4930404A12Rik-201ENSMUST00000199356 726 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Gm18423-201ENSMUST00000205144 1074 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 AC167669.1-201ENSMUST00000224932 384 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 AC101945.3-201ENSMUST00000226568 153 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 AC170600.1-201ENSMUST00000228763 277 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Snord15a-201ENSMUST00000083888 148 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 AC133079.1-201ENSMUST00000220943 1881 ntBASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 Vmn1r66-204ENSMUST00000228086 3013 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sp140Q6NSQ5 AC115047.2-201ENSMUST00000214421 1848 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Vmn1r185-207ENSMUST00000227695 5292 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm9850-201ENSMUST00000117916 227 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm15106-201ENSMUST00000119691 821 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm13518-201ENSMUST00000120018 233 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm29247-202ENSMUST00000148542 571 ntTSL 2 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm26041-201ENSMUST00000158148 108 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm22435-201ENSMUST00000158552 128 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm17072-201ENSMUST00000166673 658 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm24819-201ENSMUST00000175094 166 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm23047-201ENSMUST00000177661 94 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Mir6899-201ENSMUST00000184798 64 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm19637-201ENSMUST00000185933 579 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm29330-201ENSMUST00000190032 699 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm37343-201ENSMUST00000192542 111 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Mir7227-201ENSMUST00000200408 59 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm43914-201ENSMUST00000203592 594 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 1700027F06Rik-201ENSMUST00000203901 243 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm44475-201ENSMUST00000204041 424 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Olfr278-ps1-201ENSMUST00000205676 238 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm29818-201ENSMUST00000218070 165 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 AC140344.1-201ENSMUST00000223384 387 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 AC124400.1-201ENSMUST00000225779 193 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm25207-201ENSMUST00000093745 107 ntBASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sp140Q6NSQ5 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Zfp992-201ENSMUST00000105733 4550 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm29674-202ENSMUST00000219664 4083 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm22758-201ENSMUST00000102275 96 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm15244-201ENSMUST00000121122 130 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm23084-201ENSMUST00000157850 114 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm23782-201ENSMUST00000157939 120 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm24191-201ENSMUST00000157977 122 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm8207-201ENSMUST00000171204 502 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm25360-201ENSMUST00000178786 191 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm24862-201ENSMUST00000179103 79 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm23310-201ENSMUST00000179105 79 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm25461-201ENSMUST00000179293 79 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 1700015G11Rik-203ENSMUST00000185841 305 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm32033-201ENSMUST00000193483 339 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm37239-201ENSMUST00000193510 141 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 9530022L04Rik-201ENSMUST00000194340 310 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm37575-201ENSMUST00000195467 309 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm567-201ENSMUST00000197127 469 ntTSL 3 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm44324-201ENSMUST00000198517 135 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm36445-205ENSMUST00000211729 1100 ntTSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm18252-201ENSMUST00000214814 527 ntTSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm45540-201ENSMUST00000209271 3606 ntBASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Olfr986-203ENSMUST00000216720 3381 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sp140Q6NSQ5 Gm3956-201ENSMUST00000164882 2560 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Vmn2r36-201ENSMUST00000170402 2561 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Lztfl1-201ENSMUST00000026274 4070 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm38031-201ENSMUST00000191819 3015 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm14537-201ENSMUST00000117464 599 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm11785-201ENSMUST00000120165 601 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm23234-201ENSMUST00000157304 134 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm22257-201ENSMUST00000158687 301 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm10357-201ENSMUST00000159886 264 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Mir6933-201ENSMUST00000184982 81 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm37617-201ENSMUST00000194309 159 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Olfr542-ps1-201ENSMUST00000211706 831 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 Gm7948-201ENSMUST00000212607 844 ntBASIC3.61□□□□□ -1.83
Sp140Q6NSQ5 AC138401.1-201ENSMUST00000221533 116 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms