Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Mir669p-1-201ENSMUST00000103884 87 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm13614-201ENSMUST00000117306 503 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm11845-201ENSMUST00000117886 327 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm13510-201ENSMUST00000118659 429 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm14159-201ENSMUST00000119832 451 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm3788-201ENSMUST00000119949 136 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Rpl23a-ps13-201ENSMUST00000120350 441 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm15167-201ENSMUST00000121997 187 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm14804-201ENSMUST00000122322 508 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm22851-201ENSMUST00000178741 94 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm25074-201ENSMUST00000178782 94 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim27Q62158 Gm9696-202ENSMUST00000191541 830 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.27□□□□□ -1.89
Trim27Q62158 Gm19326-201ENSMUST00000219818 326 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 AC124537.1-201ENSMUST00000222890 159 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 AC241593.1-201ENSMUST00000224768 397 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 AC109172.2-201ENSMUST00000228792 381 ntBASIC3.27□□□□□ -1.89
Trim27Q62158 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim27Q62158 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Trim27Q62158 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.27□□□□□ -1.89
Trim27Q62158 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Trim27Q62158 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
Trim27Q62158 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l9-201ENSMUST00000101891 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26504-201ENSMUST00000102033 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Zfp967-201ENSMUST00000108997 417 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim27Q62158 Zfp969-201ENSMUST00000109027 417 ntTSL 3 BASIC3.26□□□□□ -1.89
Trim27Q62158 Zfp965-203ENSMUST00000109043 417 ntTSL 5 BASIC3.26□□□□□ -1.89
Trim27Q62158 Gm6568-201ENSMUST00000122274 697 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Trim27Q62158 Gm22597-201ENSMUST00000157602 80 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26502-201ENSMUST00000177732 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l13-201ENSMUST00000177737 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm25350-201ENSMUST00000177849 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l15-201ENSMUST00000177940 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm23446-201ENSMUST00000177977 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l4-201ENSMUST00000177982 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26201-201ENSMUST00000178047 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm24711-201ENSMUST00000178062 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm24609-201ENSMUST00000178166 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm23265-201ENSMUST00000178321 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm22812-201ENSMUST00000178329 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l3-201ENSMUST00000178370 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26246-201ENSMUST00000178388 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm25155-201ENSMUST00000178450 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm24760-201ENSMUST00000178530 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm22285-201ENSMUST00000178576 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm22417-201ENSMUST00000178656 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l2-201ENSMUST00000178675 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26270-201ENSMUST00000178690 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l16-201ENSMUST00000178777 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm23313-201ENSMUST00000178931 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l17-201ENSMUST00000178936 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm23089-201ENSMUST00000178947 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l10-201ENSMUST00000179053 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm24153-201ENSMUST00000179280 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm25597-201ENSMUST00000179388 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l1-201ENSMUST00000179518 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm25816-201ENSMUST00000179764 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l8-201ENSMUST00000179889 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l7-201ENSMUST00000179895 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l5-201ENSMUST00000179927 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l6-201ENSMUST00000179955 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26188-201ENSMUST00000179963 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm26433-201ENSMUST00000180227 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Snord116l11-201ENSMUST00000180312 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm22128-201ENSMUST00000180346 94 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm37641-201ENSMUST00000193837 239 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Gm44393-201ENSMUST00000197418 138 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 AC125350.4-201ENSMUST00000225895 273 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.26□□□□□ -1.89
Trim27Q62158 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Trim27Q62158 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Trim27Q62158 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Trim27Q62158 Gm42801-201ENSMUST00000202562 2865 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm11849-201ENSMUST00000121293 261 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC3.25□□□□□ -1.89
Trim27Q62158 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC3.25□□□□□ -1.89
Trim27Q62158 Gm22839-201ENSMUST00000158436 304 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Mir496b-201ENSMUST00000184935 113 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm8392-201ENSMUST00000185647 835 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm29429-201ENSMUST00000187071 121 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm28299-201ENSMUST00000189908 339 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm38311-201ENSMUST00000192945 165 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC3.25□□□□□ -1.89
Trim27Q62158 Gm2676-201ENSMUST00000207279 606 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Rpl31-ps1-201ENSMUST00000085128 378 ntBASIC3.25□□□□□ -1.89
Trim27Q62158 Olfr1354-202ENSMUST00000204587 3781 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Trim27Q62158 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
Trim27Q62158 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.24□□□□□ -1.89
Trim27Q62158 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Trim27Q62158 Gm11253-201ENSMUST00000118486 201 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm12878-201ENSMUST00000118744 332 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm12748-201ENSMUST00000120763 504 ntBASIC3.24□□□□□ -1.89
Trim27Q62158 Gm14069-201ENSMUST00000120815 229 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms