Protein–RNA interactions for Protein: Q61164

Ctcf, Transcriptional repressor CTCF, mousemouse

Known RBP Predictions only

Length 736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtcfQ61164 Olfr729-203ENSMUST00000215327 4220 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CtcfQ61164 Olfr729-204ENSMUST00000215451 4236 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CtcfQ61164 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.51□□□□□ -1.85
CtcfQ61164 Gm14622-201ENSMUST00000117117 468 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm11386-201ENSMUST00000117761 347 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm12025-201ENSMUST00000117768 144 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm14987-201ENSMUST00000117820 676 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm11813-201ENSMUST00000118586 291 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm25621-201ENSMUST00000157223 114 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm28579-201ENSMUST00000186143 369 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm38044-201ENSMUST00000192964 487 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm29704-201ENSMUST00000196011 253 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Gm45173-201ENSMUST00000206819 305 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
CtcfQ61164 Gm18696-201ENSMUST00000220103 274 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 AC124746.2-201ENSMUST00000226594 427 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CtcfQ61164 Gm24037-201ENSMUST00000082871 180 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Mir181a-2-201ENSMUST00000083489 76 ntBASIC3.51□□□□□ -1.85
CtcfQ61164 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CtcfQ61164 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
CtcfQ61164 Zfp991-201ENSMUST00000084149 2813 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
CtcfQ61164 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
CtcfQ61164 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm22750-201ENSMUST00000102076 103 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm14594-201ENSMUST00000118052 537 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm14590-201ENSMUST00000118934 537 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm16349-201ENSMUST00000149990 394 ntTSL 3 BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm25519-201ENSMUST00000158392 127 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm20698-201ENSMUST00000175657 233 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm25314-201ENSMUST00000178810 79 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm14596-201ENSMUST00000180268 537 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm14595-201ENSMUST00000180335 537 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Mir6413-201ENSMUST00000184049 108 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Mir6382-201ENSMUST00000184055 110 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm32447-201ENSMUST00000194265 697 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm8747-201ENSMUST00000195392 751 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm43669-201ENSMUST00000198229 436 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm44468-201ENSMUST00000199516 105 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm35931-201ENSMUST00000203931 448 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm45814-201ENSMUST00000212646 775 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.5□□□□□ -1.85
CtcfQ61164 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC3.5□□□□□ -1.85
CtcfQ61164 AC118639.1-201ENSMUST00000227204 338 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Olfr197-201ENSMUST00000080031 926 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Gm5239-201ENSMUST00000081864 369 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CtcfQ61164 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm26055-201ENSMUST00000083038 107 ntBASIC3.5□□□□□ -1.85
CtcfQ61164 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CtcfQ61164 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
CtcfQ61164 Gabra2-203ENSMUST00000197284 5852 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CtcfQ61164 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CtcfQ61164 Thoc1-201ENSMUST00000025137 3855 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
CtcfQ61164 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
CtcfQ61164 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
CtcfQ61164 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CtcfQ61164 Gm7853-201ENSMUST00000100708 478 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CtcfQ61164 Gm11784-201ENSMUST00000118568 474 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm14581-201ENSMUST00000121726 198 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 4930401O12Rik-201ENSMUST00000153175 841 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
CtcfQ61164 Gm22534-201ENSMUST00000158173 104 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Mir3066-201ENSMUST00000175296 83 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm22851-201ENSMUST00000178741 94 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm25074-201ENSMUST00000178782 94 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CtcfQ61164 Gm7329-201ENSMUST00000185915 210 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Scgb1b1-ps-201ENSMUST00000189264 268 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Ranbp2-ps11-201ENSMUST00000197185 387 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Igkv14-126-1-201ENSMUST00000199899 346 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm44295-201ENSMUST00000203805 437 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm46233-201ENSMUST00000217831 449 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC3.49□□□□□ -1.85
CtcfQ61164 Gm21007-201ENSMUST00000221024 326 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC3.49□□□□□ -1.85
CtcfQ61164 AC159621.1-201ENSMUST00000223249 163 ntBASIC3.49□□□□□ -1.85
CtcfQ61164 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
CtcfQ61164 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
CtcfQ61164 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
CtcfQ61164 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm25728-201ENSMUST00000104525 159 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm14804-201ENSMUST00000122322 508 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm17117-201ENSMUST00000163665 299 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm26195-201ENSMUST00000175035 101 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
CtcfQ61164 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm33354-201ENSMUST00000195448 906 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm44373-201ENSMUST00000196112 169 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
CtcfQ61164 Gm44030-201ENSMUST00000204865 432 ntBASIC3.48□□□□□ -1.85
CtcfQ61164 Gm44600-201ENSMUST00000208540 111 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 91.4 ms