Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 AC155314.1-201ENSMUST00000227624 508 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm24624-201ENSMUST00000082617 164 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 n-R5s196-201ENSMUST00000083136 117 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm44679-201ENSMUST00000207202 2908 ntBASIC2.04□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir599-201ENSMUST00000102378 88 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm11268-201ENSMUST00000118347 267 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm12016-201ENSMUST00000119079 681 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm23415-201ENSMUST00000175519 83 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Mir6985-201ENSMUST00000184641 61 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm19123-201ENSMUST00000190716 651 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm37002-201ENSMUST00000194560 373 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm43489-201ENSMUST00000196810 993 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm23932-201ENSMUST00000082914 107 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Gm44562-201ENSMUST00000207194 1347 ntBASIC2.03□□□□□ -2.08
Ccdc88aQ5SNZ0 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14882-201ENSMUST00000117216 218 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13901-201ENSMUST00000137252 468 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm22665-201ENSMUST00000158720 275 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm24174-201ENSMUST00000158933 111 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm25026-201ENSMUST00000175017 188 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23053-201ENSMUST00000175136 96 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm27942-201ENSMUST00000184669 101 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm43070-201ENSMUST00000196938 415 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44332-201ENSMUST00000203712 433 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm43994-201ENSMUST00000203809 227 ntTSL 5 BASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 AC154552.5-201ENSMUST00000222352 207 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 AC124524.1-201ENSMUST00000225833 181 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm25856-201ENSMUST00000082786 75 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm26055-201ENSMUST00000083038 107 ntBASIC2.03□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13714-201ENSMUST00000117313 221 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13731-201ENSMUST00000117332 196 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13046-201ENSMUST00000117391 501 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14588-201ENSMUST00000119895 172 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14898-201ENSMUST00000120202 645 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm14903-201ENSMUST00000122435 537 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm17186-201ENSMUST00000171742 456 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm7909-201ENSMUST00000182688 614 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm27861-201ENSMUST00000183920 214 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm18667-201ENSMUST00000186523 484 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.02□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23431-201ENSMUST00000104006 107 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm6923-201ENSMUST00000118343 406 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm28779-201ENSMUST00000189678 323 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm38238-201ENSMUST00000194334 346 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm45614-201ENSMUST00000209994 721 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm25403-201ENSMUST00000082971 143 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm10271-201ENSMUST00000092165 156 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm43216-201ENSMUST00000196295 1333 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23336-201ENSMUST00000117023 123 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm15282-201ENSMUST00000117707 300 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm13676-201ENSMUST00000122185 591 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm4916-201ENSMUST00000126139 642 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Far1os-201ENSMUST00000138253 893 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm24783-201ENSMUST00000157639 100 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm19641-201ENSMUST00000188432 417 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm18729-201ENSMUST00000217230 621 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 AC126673.2-201ENSMUST00000221052 686 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 AC123860.1-201ENSMUST00000228033 481 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr914-201ENSMUST00000057755 951 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.01□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm44708-201ENSMUST00000205580 2237 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm11252-201ENSMUST00000120572 939 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Mup-ps1-201ENSMUST00000120720 544 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm23167-201ENSMUST00000157155 103 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm25051-201ENSMUST00000158602 249 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm26365-201ENSMUST00000179177 94 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm21294-201ENSMUST00000186443 934 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm20811-201ENSMUST00000190500 553 ntBASIC2□□□□□ -2.09
Ccdc88aQ5SNZ0 Gm17935-201ENSMUST00000196649 772 ntBASIC2□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 99.1 ms