Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Mir208b-201ENSMUST00000104735 77 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Cypt15-201ENSMUST00000115114 519 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm15126-201ENSMUST00000118631 833 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm14292-201ENSMUST00000118761 456 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm11598-201ENSMUST00000119257 357 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm12706-201ENSMUST00000121588 698 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm15038-201ENSMUST00000122144 296 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm15530-201ENSMUST00000122206 555 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Mir1904-201ENSMUST00000122702 80 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm17711-201ENSMUST00000172028 237 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm21638-201ENSMUST00000179473 836 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Mir7667-201ENSMUST00000183866 63 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Mir6933-201ENSMUST00000184982 81 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm29429-201ENSMUST00000187071 121 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm28054-201ENSMUST00000187280 872 ntTSL 3 BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm20937-202ENSMUST00000189084 811 ntTSL 1 (best) BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm8403-201ENSMUST00000189712 1298 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm20736-203ENSMUST00000190282 836 ntTSL 1 (best) BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm37692-201ENSMUST00000192633 232 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm8747-201ENSMUST00000195392 751 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Igkv11-118-201ENSMUST00000199448 346 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm43587-201ENSMUST00000199590 204 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm44041-201ENSMUST00000203678 396 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm7443-201ENSMUST00000206355 378 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Olfr1455-ps1-201ENSMUST00000208608 771 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm45614-201ENSMUST00000209994 721 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm23100-201ENSMUST00000083455 141 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm23040-201ENSMUST00000083869 163 ntBASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1□□□□□ -2.25
Trav3-1Q5R1I8 Gm24865-201ENSMUST00000103246 96 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Igkv11-106-201ENSMUST00000103331 346 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm23431-201ENSMUST00000104006 107 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm6923-201ENSMUST00000118343 406 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm11352-201ENSMUST00000119264 517 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm14564-201ENSMUST00000122159 294 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm24478-201ENSMUST00000157439 158 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm22382-201ENSMUST00000158185 130 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm24677-201ENSMUST00000158755 150 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm15508-201ENSMUST00000160330 325 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm7953-201ENSMUST00000168278 469 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Snord87-201ENSMUST00000175437 87 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Mir5710-201ENSMUST00000176884 69 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Mir7678-201ENSMUST00000185076 71 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm7692-201ENSMUST00000213534 409 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 AL929285.1-201ENSMUST00000215522 229 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 AC134601.3-201ENSMUST00000221682 154 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm23245-201ENSMUST00000083370 135 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 AF357428-201ENSMUST00000083815 69 ntBASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm813-201ENSMUST00000099663 702 ntAPPRIS P1 TSL 1 (best) BASIC0.99□□□□□ -2.25
Trav3-1Q5R1I8 Gm19194-201ENSMUST00000192015 3774 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm23472-201ENSMUST00000101806 191 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25647-201ENSMUST00000101832 78 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25823-201ENSMUST00000101995 78 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm26247-201ENSMUST00000116702 91 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm15103-201ENSMUST00000119893 871 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm12693-201ENSMUST00000121965 483 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm14800-201ENSMUST00000122084 1272 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Mir3965-201ENSMUST00000175570 69 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm24220-201ENSMUST00000177753 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25988-201ENSMUST00000177759 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm24497-201ENSMUST00000177868 191 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm23471-201ENSMUST00000177886 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm26488-201ENSMUST00000178225 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm23449-201ENSMUST00000179208 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm23860-201ENSMUST00000179446 132 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25939-201ENSMUST00000179876 191 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25221-201ENSMUST00000180051 79 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm27505-201ENSMUST00000185071 110 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm43659-201ENSMUST00000200894 628 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm17991-201ENSMUST00000208139 297 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm45409-201ENSMUST00000211486 252 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 CT025538.2-201ENSMUST00000226083 772 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm10038-201ENSMUST00000077233 441 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm25813-201ENSMUST00000082748 191 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm23444-201ENSMUST00000082922 191 ntBASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Gm14325-203ENSMUST00000188914 1494 ntTSL 5 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC0.98□□□□□ -2.25
Trav3-1Q5R1I8 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Gm23889-201ENSMUST00000122689 104 ntBASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Gm24505-201ENSMUST00000157682 126 ntBASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Gm25603-201ENSMUST00000158361 105 ntBASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Gm24837-201ENSMUST00000158683 81 ntBASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Mir1264-201ENSMUST00000175381 86 ntBASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC0.97□□□□□ -2.25
Trav3-1Q5R1I8 Sult2a6-202ENSMUST00000184731 664 ntTSL 1 (best) BASIC0.97□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms