Protein–RNA interactions for Protein: Q5QNQ9

Col27a1, Collagen alpha-1(XXVII) chain, mousemouse

Predictions only

Length 1,845 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1Q5QNQ9 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Gm4855-201ENSMUST00000192270 1967 ntBASIC1.79□□□□□ -2.12
Col27a1Q5QNQ9 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm12891-201ENSMUST00000119358 240 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm22839-201ENSMUST00000158436 304 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm23190-201ENSMUST00000180307 64 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm29513-201ENSMUST00000185741 202 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 B230110G15Rik-201ENSMUST00000190868 772 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm37576-201ENSMUST00000194228 372 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm19457-201ENSMUST00000200995 448 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm18410-201ENSMUST00000207199 577 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm26439-201ENSMUST00000082592 106 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm25799-201ENSMUST00000082643 107 ntBASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col27a1Q5QNQ9 Gm14404-201ENSMUST00000119117 1660 ntBASIC1.78□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Zfp972-203ENSMUST00000108986 192 ntTSL 5 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm13087-201ENSMUST00000118298 256 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm12016-201ENSMUST00000119079 681 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm14731-201ENSMUST00000119216 376 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm12721-201ENSMUST00000120621 268 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm15115-201ENSMUST00000121145 264 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 n-R5s191-201ENSMUST00000122724 116 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm26870-202ENSMUST00000181572 1143 ntTSL 5 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm26960-201ENSMUST00000182263 412 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm27861-201ENSMUST00000183920 214 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm8676-201ENSMUST00000184206 637 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Trbv12-3-201ENSMUST00000192675 372 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm18433-201ENSMUST00000192747 197 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm43043-201ENSMUST00000196579 412 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm44720-201ENSMUST00000206076 260 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Vmn2r-ps102-203ENSMUST00000222739 604 ntTSL 5 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Mir667-201ENSMUST00000102441 92 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm13239-201ENSMUST00000119920 637 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm15037-201ENSMUST00000120358 259 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm14979-201ENSMUST00000121561 1035 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm24960-201ENSMUST00000157923 90 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm23473-201ENSMUST00000158883 116 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Cep41-210ENSMUST00000169422 438 ntTSL 3 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Olfr421-ps1-201ENSMUST00000179386 1050 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm18729-201ENSMUST00000217230 621 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 AC141895.1-201ENSMUST00000218141 273 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm45965-201ENSMUST00000221192 1284 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Gm22507-201ENSMUST00000082773 160 ntBASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r87-202ENSMUST00000211249 1835 ntAPPRIS P1 TSL 3 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Col27a1Q5QNQ9 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm15282-201ENSMUST00000117707 300 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Mup-ps1-201ENSMUST00000120720 544 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm2005-201ENSMUST00000120759 542 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm12327-201ENSMUST00000121729 1168 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm6788-201ENSMUST00000166459 270 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm5168-202ENSMUST00000168002 636 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm26652-202ENSMUST00000181672 475 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm27599-201ENSMUST00000183758 174 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Mir6985-201ENSMUST00000184641 61 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm43489-201ENSMUST00000196810 993 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm30738-201ENSMUST00000221346 502 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 AC144628.2-201ENSMUST00000227374 352 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm10038-201ENSMUST00000077233 441 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Gm5583-201ENSMUST00000174328 1519 ntBASIC1.76□□□□□ -2.13
Col27a1Q5QNQ9 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm15061-201ENSMUST00000121076 1046 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm9001-201ENSMUST00000121642 399 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Mir1927-201ENSMUST00000158579 109 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm24552-201ENSMUST00000158646 103 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm18397-201ENSMUST00000176704 587 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm37979-201ENSMUST00000193065 712 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm45614-201ENSMUST00000209994 721 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm22293-201ENSMUST00000083314 109 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Mir320-201ENSMUST00000083594 82 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm11357-201ENSMUST00000119758 954 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm3104-201ENSMUST00000171004 473 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm23053-201ENSMUST00000175136 96 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm28412-201ENSMUST00000187243 177 ntBASIC1.75□□□□□ -2.13
Col27a1Q5QNQ9 Gm37578-201ENSMUST00000192256 1177 ntBASIC1.75□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms