Protein–RNA interactions for Protein: Q5I043

Usp28, Ubiquitin carboxyl-terminal hydrolase 28, mousemouse

Predictions only

Length 1,051 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp28Q5I043 Gm27369-201ENSMUST00000185182 71 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm28474-201ENSMUST00000188501 315 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm28744-201ENSMUST00000189939 340 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm31230-201ENSMUST00000199725 785 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm44083-201ENSMUST00000203114 337 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.48□□□□□ -2.01
Usp28Q5I043 AC159621.1-201ENSMUST00000223249 163 ntBASIC2.48□□□□□ -2.01
Usp28Q5I043 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14594-201ENSMUST00000118052 537 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14590-201ENSMUST00000118934 537 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14945-201ENSMUST00000119556 1118 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm15529-201ENSMUST00000121833 994 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14821-201ENSMUST00000121975 435 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Rpl30-ps9-201ENSMUST00000122265 345 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm22957-201ENSMUST00000122511 123 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm24910-201ENSMUST00000157289 272 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm22225-201ENSMUST00000157358 278 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm25365-201ENSMUST00000158852 121 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm8580-201ENSMUST00000160295 464 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm24100-201ENSMUST00000178592 79 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm24137-201ENSMUST00000180055 79 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14596-201ENSMUST00000180268 537 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm14595-201ENSMUST00000180335 537 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm22391-201ENSMUST00000180356 79 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm27817-201ENSMUST00000184302 233 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gtpbp4-ps5-201ENSMUST00000184969 289 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm28900-201ENSMUST00000185232 156 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm37754-201ENSMUST00000194406 452 ntTSL 5 BASIC2.47□□□□□ -2.01
Usp28Q5I043 Mir6925-201ENSMUST00000197857 70 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 AC144733.1-201ENSMUST00000222893 1289 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 AC165146.1-201ENSMUST00000223777 900 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 AC154527.5-201ENSMUST00000224448 496 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 AC158521.1-201ENSMUST00000225295 660 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Mir19a-201ENSMUST00000083482 82 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Gm23503-201ENSMUST00000083903 107 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Usp28Q5I043 AC154511.1-201ENSMUST00000222578 1587 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 AC167192.3-201ENSMUST00000224096 1567 ntBASIC2.47□□□□□ -2.01
Usp28Q5I043 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Usp28Q5I043 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Usp28Q5I043 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm14292-201ENSMUST00000118761 456 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm14694-201ENSMUST00000121856 282 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm15878-201ENSMUST00000127561 306 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm24857-201ENSMUST00000158061 310 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm17186-201ENSMUST00000171742 456 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Mir5129-201ENSMUST00000174938 78 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm26189-201ENSMUST00000179879 107 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Usp28Q5I043 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.46□□□□□ -2.02
Usp28Q5I043 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp28Q5I043 AC158395.1-201ENSMUST00000227206 452 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 AC133076.1-201ENSMUST00000228074 484 ntBASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr1002-201ENSMUST00000099920 957 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Usp28Q5I043 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm22658-201ENSMUST00000104196 155 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm26474-201ENSMUST00000116762 122 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm11784-201ENSMUST00000118568 474 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm15112-201ENSMUST00000120152 860 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm12825-201ENSMUST00000120249 563 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm12045-201ENSMUST00000122122 573 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm14333-201ENSMUST00000130484 264 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm23033-201ENSMUST00000157996 134 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm24900-201ENSMUST00000158128 134 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Mir3964-201ENSMUST00000174898 74 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm21726-201ENSMUST00000179654 392 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm25156-201ENSMUST00000179809 79 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Anks1b-207ENSMUST00000182045 544 ntTSL 3 BASIC2.45□□□□□ -2.02
Usp28Q5I043 Mir6541-201ENSMUST00000183649 110 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm28283-201ENSMUST00000185509 178 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm29550-201ENSMUST00000185543 285 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm45071-201ENSMUST00000205353 571 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AC124542.1-201ENSMUST00000205588 908 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
Usp28Q5I043 AC138667.2-201ENSMUST00000224880 598 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AC170810.3-201ENSMUST00000226177 374 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 AC166344.2-201ENSMUST00000226747 374 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Mir423-201ENSMUST00000083584 109 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Gm24490-201ENSMUST00000083803 98 ntBASIC2.45□□□□□ -2.02
Usp28Q5I043 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 97.4 ms