Protein–RNA interactions for Protein: Q4QRL3

Ccdc88b, Coiled-coil domain-containing protein 88B, mousemouse

Predictions only

Length 1,481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88bQ4QRL3 Gm8676-201ENSMUST00000184206 637 ntBASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm42533-201ENSMUST00000196247 157 ntBASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm31230-201ENSMUST00000199725 785 ntBASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 E330017A01Rik-201ENSMUST00000053249 1108 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Olfr967-201ENSMUST00000069561 933 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Ccdc88bQ4QRL3 Gm13577-201ENSMUST00000121365 205 ntBASIC1.84□□□□□ -2.11
Ccdc88bQ4QRL3 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC1.84□□□□□ -2.11
Ccdc88bQ4QRL3 CT009718.1-201ENSMUST00000220784 395 ntTSL 2 BASIC1.84□□□□□ -2.11
Ccdc88bQ4QRL3 Gm24207-201ENSMUST00000082781 108 ntBASIC1.84□□□□□ -2.11
Ccdc88bQ4QRL3 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC1.84□□□□□ -2.11
Ccdc88bQ4QRL3 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.12
Ccdc88bQ4QRL3 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Gm24467-201ENSMUST00000157887 126 ntBASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Gm37005-201ENSMUST00000193281 1164 ntBASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Arhgap5-202ENSMUST00000217820 2332 ntTSL 5 BASIC1.83□□□□□ -2.12
Ccdc88bQ4QRL3 Gm24865-201ENSMUST00000103246 96 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 CT030159.4-201ENSMUST00000221966 395 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Gm22980-201ENSMUST00000082608 70 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Gm23705-201ENSMUST00000104370 130 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Gm16363-201ENSMUST00000132460 877 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Gm27265-201ENSMUST00000183559 77 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 Scgb2b9-ps-201ENSMUST00000189522 334 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 4921511E07Rik-201ENSMUST00000194790 827 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 AC160962.2-201ENSMUST00000224761 632 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 AC158521.1-201ENSMUST00000225295 660 ntBASIC1.82□□□□□ -2.12
Ccdc88bQ4QRL3 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Gm22431-201ENSMUST00000158545 107 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Gm28932-201ENSMUST00000186300 357 ntTSL 5 BASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Gm18892-201ENSMUST00000217628 881 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 AC130222.1-201ENSMUST00000221198 256 ntBASIC1.81□□□□□ -2.12
Ccdc88bQ4QRL3 Gm24579-201ENSMUST00000103964 144 ntBASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Mir5098-201ENSMUST00000175320 82 ntBASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Gm37021-201ENSMUST00000195835 663 ntTSL 5 BASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Gm29809-201ENSMUST00000218423 493 ntBASIC1.8□□□□□ -2.12
Ccdc88bQ4QRL3 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Gm11785-201ENSMUST00000120165 601 ntBASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Gm22107-201ENSMUST00000122548 100 ntBASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Gm22485-201ENSMUST00000157990 109 ntBASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Gm42774-201ENSMUST00000198854 283 ntBASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Olfr165-202ENSMUST00000206110 1862 ntAPPRIS ALT1 TSL 3 BASIC1.79□□□□□ -2.12
Ccdc88bQ4QRL3 Gm2830-201ENSMUST00000140330 385 ntBASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Gm26348-201ENSMUST00000157528 240 ntBASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Gm26089-201ENSMUST00000157898 107 ntBASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Gm25375-201ENSMUST00000158157 135 ntBASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Gm37557-201ENSMUST00000191640 139 ntBASIC1.78□□□□□ -2.12
Ccdc88bQ4QRL3 Trbv17-201ENSMUST00000103275 374 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Gm27864-201ENSMUST00000183704 190 ntBASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Gm18982-201ENSMUST00000198118 529 ntBASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Gm25199-201ENSMUST00000083095 104 ntBASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
Ccdc88bQ4QRL3 Gm24555-201ENSMUST00000104548 124 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm25454-201ENSMUST00000157947 315 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm19932-201ENSMUST00000177033 313 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm25633-201ENSMUST00000178565 107 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm42701-201ENSMUST00000196117 1657 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm17935-201ENSMUST00000196649 772 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm19244-201ENSMUST00000204340 253 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 AC163357.1-201ENSMUST00000220847 233 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 A630081D01Rik-201ENSMUST00000195842 1833 ntBASIC1.76□□□□□ -2.13
Ccdc88bQ4QRL3 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Gm26358-201ENSMUST00000158215 97 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Gm22839-201ENSMUST00000158436 304 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Vamp4-208ENSMUST00000194810 600 ntTSL 5 BASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Gm43652-201ENSMUST00000196219 675 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 AC105169.1-201ENSMUST00000218912 1294 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Gm11862-201ENSMUST00000119678 659 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 AC211878.4-201ENSMUST00000220970 262 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 AC126554.1-201ENSMUST00000222161 271 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Mir27b-201ENSMUST00000083541 73 ntBASIC1.75□□□□□ -2.13
Ccdc88bQ4QRL3 Gm42942-201ENSMUST00000196086 1328 ntBASIC1.74□□□□□ -2.13
Ccdc88bQ4QRL3 Gm26414-201ENSMUST00000157674 269 ntBASIC1.74□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 85.5 ms