Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12656-201ENSMUST00000118149 577 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Klrc1-203ENSMUST00000118447 684 ntAPPRIS P3 TSL 1 (best) BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm12294-201ENSMUST00000119723 490 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm24060-201ENSMUST00000157494 95 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Mir1927-201ENSMUST00000158579 109 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm24154-201ENSMUST00000175261 130 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm43493-201ENSMUST00000199837 202 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm44634-201ENSMUST00000206119 152 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm43960-201ENSMUST00000204249 5020 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm7648-201ENSMUST00000173036 1658 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Olfr1325-203ENSMUST00000216108 3535 ntAPPRIS ALT2 TSL 5 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm13194-201ENSMUST00000142299 311 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm23034-201ENSMUST00000158001 147 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm23312-201ENSMUST00000158774 102 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm27718-201ENSMUST00000183721 86 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm29658-201ENSMUST00000185404 230 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm18667-201ENSMUST00000186523 484 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm29604-201ENSMUST00000187176 163 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Npn2-202ENSMUST00000189275 235 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm38039-201ENSMUST00000195328 443 ntTSL 5 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm43070-201ENSMUST00000196938 415 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm43732-201ENSMUST00000200260 511 ntTSL 1 (best) BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm19709-201ENSMUST00000215403 482 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Shank3Q4ACU6 AC174797.4-201ENSMUST00000225510 347 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 AL590614.1-201ENSMUST00000226037 268 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm26439-201ENSMUST00000082592 106 ntBASIC2.25□□□□□ -2.05
Shank3Q4ACU6 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm7489-201ENSMUST00000100666 1222 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm14517-201ENSMUST00000119040 337 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm12016-201ENSMUST00000119079 681 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm13210-201ENSMUST00000121483 273 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm9001-201ENSMUST00000121642 399 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm15065-201ENSMUST00000121699 273 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm22036-201ENSMUST00000157279 215 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm25161-201ENSMUST00000158913 132 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm7346-201ENSMUST00000169661 476 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Mir1954-201ENSMUST00000175595 86 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Cldn34c3-201ENSMUST00000178148 702 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm44476-201ENSMUST00000196225 91 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm43619-201ENSMUST00000197267 914 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 AC117232.1-201ENSMUST00000197964 119 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm45687-201ENSMUST00000209454 155 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm46194-201ENSMUST00000218136 320 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 AC121960.3-201ENSMUST00000227077 623 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm23939-201ENSMUST00000082880 133 ntBASIC2.24□□□□□ -2.05
Shank3Q4ACU6 Gm25787-201ENSMUST00000104709 92 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm15087-201ENSMUST00000117465 1172 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm12926-201ENSMUST00000121158 409 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm9785-202ENSMUST00000144563 593 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm24174-201ENSMUST00000158933 111 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm28127-201ENSMUST00000185293 622 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm28850-201ENSMUST00000189058 622 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm35262-201ENSMUST00000215133 267 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm6369-201ENSMUST00000069626 412 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Olfr1148-202ENSMUST00000215230 3095 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Cpxcr1-201ENSMUST00000101269 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm42862-201ENSMUST00000197494 2621 ntBASIC2.23□□□□□ -2.05
Shank3Q4ACU6 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm13678-201ENSMUST00000118926 340 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm14008-201ENSMUST00000120483 274 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm11252-201ENSMUST00000120572 939 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm6591-201ENSMUST00000121063 434 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm22929-201ENSMUST00000175517 107 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm27861-201ENSMUST00000183920 214 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm43659-201ENSMUST00000200894 628 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm44076-201ENSMUST00000203072 520 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Olfr534-ps1-201ENSMUST00000211776 870 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm10770-201ENSMUST00000099418 714 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm14404-201ENSMUST00000119117 1660 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm12512-201ENSMUST00000119620 217 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.22□□□□□ -2.05
Shank3Q4ACU6 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 136.8 ms