Protein–RNA interactions for Protein: Q3V1H1

Ckap2, Cytoskeleton-associated protein 2, mousemouse

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap2Q3V1H1 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Snord14c-201ENSMUST00000101927 86 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Trav16n-201ENSMUST00000103633 353 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm12954-201ENSMUST00000118610 611 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm25637-201ENSMUST00000157529 107 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm24681-201ENSMUST00000158760 107 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm20534-201ENSMUST00000172957 172 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm43431-201ENSMUST00000198577 340 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Mir9-1-201ENSMUST00000199907 89 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm44071-201ENSMUST00000204180 448 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm29809-201ENSMUST00000218423 493 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 AC131720.2-201ENSMUST00000220420 431 ntBASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm21814-203ENSMUST00000203729 1352 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
Ckap2Q3V1H1 Gm43379-201ENSMUST00000196253 7726 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Rag2-201ENSMUST00000044031 3424 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 E430014B02Rik-201ENSMUST00000194215 3156 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm9850-201ENSMUST00000117916 227 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm14877-201ENSMUST00000119803 478 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm8880-201ENSMUST00000121800 454 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm26027-201ENSMUST00000122725 268 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm25807-201ENSMUST00000122783 305 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Ssxb6-201ENSMUST00000138642 518 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm25621-201ENSMUST00000157223 114 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm25341-201ENSMUST00000157461 268 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Krtap27-1-201ENSMUST00000165580 646 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Fam184a-206ENSMUST00000169866 501 ntTSL 5 BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm26195-201ENSMUST00000175035 101 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm28390-201ENSMUST00000185212 700 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm21673-201ENSMUST00000186640 436 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm21135-201ENSMUST00000189023 436 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm9227-201ENSMUST00000194733 566 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Csn1s2a-203ENSMUST00000196749 917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm31752-201ENSMUST00000199456 856 ntTSL 2 BASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm44142-201ENSMUST00000203358 311 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm44526-201ENSMUST00000204664 121 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Ear14-201ENSMUST00000049559 468 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm9818-201ENSMUST00000050900 255 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm23741-201ENSMUST00000097237 171 ntBASIC3.18□□□□□ -1.9
Ckap2Q3V1H1 Gm8935-201ENSMUST00000066794 2798 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm43889-201ENSMUST00000203950 3681 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Mir669o-201ENSMUST00000103898 96 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm25500-201ENSMUST00000104426 123 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm12492-201ENSMUST00000117665 564 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm14392-201ENSMUST00000120332 401 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm14413-201ENSMUST00000122158 408 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm25283-201ENSMUST00000157272 77 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm22330-201ENSMUST00000158068 115 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm23409-201ENSMUST00000158516 237 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm24552-201ENSMUST00000158646 103 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Snord116l14-201ENSMUST00000179875 94 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Mir6363-201ENSMUST00000184880 114 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm27249-201ENSMUST00000185049 328 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm37428-201ENSMUST00000193886 137 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm19147-201ENSMUST00000199622 652 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm44961-201ENSMUST00000207450 196 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm46312-201ENSMUST00000220961 420 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 AC134860.6-201ENSMUST00000226038 285 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Stfa3-201ENSMUST00000068182 412 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm23650-201ENSMUST00000083355 70 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm42448-201ENSMUST00000197122 2644 ntBASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
Ckap2Q3V1H1 Gm11221-201ENSMUST00000117230 597 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm12806-201ENSMUST00000119384 268 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm11512-201ENSMUST00000119669 663 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm11582-201ENSMUST00000121041 236 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm13368-201ENSMUST00000122443 430 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm22452-201ENSMUST00000122804 104 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm22516-201ENSMUST00000158266 124 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm24736-201ENSMUST00000158862 130 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm25470-201ENSMUST00000175576 111 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm26968-201ENSMUST00000182894 481 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm18964-201ENSMUST00000193013 563 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm32447-201ENSMUST00000194265 697 ntBASIC3.16□□□□□ -1.9
Ckap2Q3V1H1 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC3.16□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 94.2 ms