Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm21562-201ENSMUST00000177888 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21539-201ENSMUST00000177925 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17522-201ENSMUST00000178144 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21599-201ENSMUST00000178249 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21914-201ENSMUST00000178452 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21723-201ENSMUST00000178692 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21916-201ENSMUST00000178771 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21801-201ENSMUST00000178865 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21633-201ENSMUST00000178941 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm26297-201ENSMUST00000179464 132 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21821-201ENSMUST00000179646 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21588-201ENSMUST00000180074 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21780-201ENSMUST00000180128 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21572-201ENSMUST00000180134 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm21529-201ENSMUST00000180175 498 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm28489-201ENSMUST00000186655 316 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm29370-202ENSMUST00000187476 499 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm38261-201ENSMUST00000192608 316 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm43140-201ENSMUST00000197317 456 ntTSL 2 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm15235-201ENSMUST00000200572 194 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AL450317.1-201ENSMUST00000213941 291 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AC122194.1-201ENSMUST00000220549 293 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AC116589.7-201ENSMUST00000221061 239 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm19441-201ENSMUST00000221545 330 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AC164117.1-201ENSMUST00000221726 239 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 AC192333.2-201ENSMUST00000224771 196 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm25199-201ENSMUST00000083095 104 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Mir27a-201ENSMUST00000083510 87 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm25859-201ENSMUST00000083710 91 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm25411-201ENSMUST00000083760 151 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm42659-201ENSMUST00000196955 1754 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.66□□□□□ -1.98
Trim40Q3UWA4 Gm17969-201ENSMUST00000185706 2557 ntBASIC2.65□□□□□ -1.98
Trim40Q3UWA4 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Trim40Q3UWA4 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC2.65□□□□□ -1.98
Trim40Q3UWA4 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Mir466f-3-201ENSMUST00000104788 94 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm14020-201ENSMUST00000118165 662 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm6274-201ENSMUST00000118173 797 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm12053-201ENSMUST00000119022 252 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm15030-201ENSMUST00000119804 484 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm11785-201ENSMUST00000120165 601 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm13368-201ENSMUST00000122443 430 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 n-R5s216-201ENSMUST00000122755 112 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm22098-201ENSMUST00000157930 85 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm22330-201ENSMUST00000158068 115 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm24730-201ENSMUST00000158228 117 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm23068-201ENSMUST00000158239 293 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm24498-201ENSMUST00000158445 102 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm20651-201ENSMUST00000177219 329 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm27660-201ENSMUST00000184028 208 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm29413-201ENSMUST00000186019 880 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm29639-201ENSMUST00000188375 580 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm37085-201ENSMUST00000193780 196 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm43562-201ENSMUST00000196439 238 ntTSL 3 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm19202-201ENSMUST00000198096 808 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm8041-201ENSMUST00000199755 616 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm44011-201ENSMUST00000203336 394 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm44118-201ENSMUST00000204665 229 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm44472-201ENSMUST00000204922 943 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm45772-201ENSMUST00000212961 240 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gnrh1-202ENSMUST00000223929 428 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 AC118639.1-204ENSMUST00000226401 694 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 AC102603.1-201ENSMUST00000227481 584 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 AC107453.2-201ENSMUST00000227714 655 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm9174-201ENSMUST00000078149 255 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm6030-201ENSMUST00000078768 402 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC2.65□□□□□ -1.99
Trim40Q3UWA4 Gm38382-201ENSMUST00000193790 2499 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm13343-201ENSMUST00000116474 105 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm26473-201ENSMUST00000116763 127 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm13803-201ENSMUST00000117547 489 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Gm15175-201ENSMUST00000117629 132 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC2.64□□□□□ -1.99
Trim40Q3UWA4 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms