Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Gm14594-201ENSMUST00000118052 537 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm11813-201ENSMUST00000118586 291 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm14590-201ENSMUST00000118934 537 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm15266-201ENSMUST00000119635 255 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm14366-201ENSMUST00000121970 730 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm25784-201ENSMUST00000122524 81 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm16351-201ENSMUST00000142008 250 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm15969-201ENSMUST00000151967 236 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm23470-201ENSMUST00000157129 120 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm22555-201ENSMUST00000157801 62 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm25706-201ENSMUST00000157828 247 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm22416-201ENSMUST00000158590 88 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm25119-201ENSMUST00000158815 88 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Mir3092-201ENSMUST00000174954 96 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm14596-201ENSMUST00000180268 537 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm14595-201ENSMUST00000180335 537 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm27919-201ENSMUST00000185163 107 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm28163-201ENSMUST00000187099 325 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Ighv1-46-201ENSMUST00000193988 351 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm38146-201ENSMUST00000194121 1293 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm44012-201ENSMUST00000204154 424 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm44073-201ENSMUST00000204173 429 ntTSL 3 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Tslp-201ENSMUST00000025237 1133 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Gm43924-201ENSMUST00000204851 1736 ntBASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Olfr1051-204ENSMUST00000217294 2840 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
Trafd1Q3UDK1 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Olfr913-201ENSMUST00000081095 2441 ntAPPRIS P1 TSL 3 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 AC153526.2-201ENSMUST00000218206 2031 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm23744-201ENSMUST00000104231 149 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm12492-201ENSMUST00000117665 564 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm14867-201ENSMUST00000120156 866 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm15381-201ENSMUST00000121501 1156 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm14766-201ENSMUST00000121689 367 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm21726-201ENSMUST00000179654 392 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Mir6363-201ENSMUST00000184880 114 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Mir6372-201ENSMUST00000185114 109 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Smr3a-202ENSMUST00000189633 467 ntAPPRIS ALT2 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm18296-201ENSMUST00000192475 783 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm37550-201ENSMUST00000193230 463 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm37616-201ENSMUST00000193974 322 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Nras-ps2-201ENSMUST00000195269 178 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm43355-201ENSMUST00000196541 346 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm44609-201ENSMUST00000207157 460 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 AC115289.1-201ENSMUST00000224915 522 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm10025-201ENSMUST00000079568 372 ntBASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm10717-202ENSMUST00000099042 669 ntAPPRIS P5 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Vmn2r74-201ENSMUST00000166355 2562 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Olfr1051-202ENSMUST00000216432 2807 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Olfr1051-203ENSMUST00000217245 2821 ntAPPRIS P1 TSL 5 BASIC2.6□□□□□ -1.99
Trafd1Q3UDK1 Gm7145-201ENSMUST00000185381 1794 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Olfr1229-202ENSMUST00000213883 3594 ntAPPRIS P1 TSL 5 BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm43230-201ENSMUST00000200980 2129 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Hormad1-202ENSMUST00000090797 1511 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Mir344c-201ENSMUST00000103919 92 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Snora36b-201ENSMUST00000104383 132 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm25507-201ENSMUST00000116981 144 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm25808-201ENSMUST00000122784 284 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm25294-201ENSMUST00000122791 104 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm23600-201ENSMUST00000157260 71 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm24436-201ENSMUST00000157889 302 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Mir5136-201ENSMUST00000175573 76 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm19641-201ENSMUST00000188432 417 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm37757-201ENSMUST00000193072 210 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm30341-201ENSMUST00000194363 289 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Olfr468-ps1-201ENSMUST00000207203 593 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm45366-201ENSMUST00000209828 384 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 CT010506.2-201ENSMUST00000225618 183 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Defb37-201ENSMUST00000066282 352 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Tas2r114-201ENSMUST00000080619 930 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm23645-201ENSMUST00000083228 108 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm4017-201ENSMUST00000084813 338 ntBASIC2.59□□□□□ -1.99
Trafd1Q3UDK1 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms