Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm45312-201ENSMUST00000210566 311 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm18854-201ENSMUST00000211196 329 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm5358-201ENSMUST00000212814 353 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm46233-201ENSMUST00000217831 449 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm35405-201ENSMUST00000218754 400 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 AC132954.1-201ENSMUST00000221017 342 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 AC157572.3-201ENSMUST00000227288 303 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm25579-201ENSMUST00000083407 106 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm23096-201ENSMUST00000083447 107 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm23345-201ENSMUST00000083817 150 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Klra3-201ENSMUST00000088017 984 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 AC132237.1-201ENSMUST00000220950 4475 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r56-201ENSMUST00000169556 1832 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Gm43047-201ENSMUST00000200089 3460 ntBASIC4.25□□□□□ -1.73
Ddb1Q3U1J4 Olfr1150-ps1-201ENSMUST00000121186 3311 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm35835-202ENSMUST00000216984 3350 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 A230081H15Rik-201ENSMUST00000218326 2929 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm13167-201ENSMUST00000118554 578 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm25621-201ENSMUST00000157223 114 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm28016-201ENSMUST00000184594 196 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm37431-201ENSMUST00000195102 111 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm24350-202ENSMUST00000198309 132 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm45031-201ENSMUST00000206800 288 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Scgb1a1-201ENSMUST00000025554 476 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Olfr1454-203ENSMUST00000214695 4049 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r206-202ENSMUST00000227244 3970 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Gm42536-201ENSMUST00000197562 1613 ntBASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
Ddb1Q3U1J4 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r81-203ENSMUST00000227973 14002 ntAPPRIS P2 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Olfr502-202ENSMUST00000216919 3282 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm37298-201ENSMUST00000193770 3868 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm14429-201ENSMUST00000121881 2024 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm22674-201ENSMUST00000104413 131 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm12871-201ENSMUST00000118758 438 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm13692-201ENSMUST00000120774 371 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm12023-201ENSMUST00000145182 520 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm24691-201ENSMUST00000157762 140 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm26468-201ENSMUST00000158644 106 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm24225-201ENSMUST00000158825 98 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm24737-201ENSMUST00000158861 100 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm15900-201ENSMUST00000161584 342 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm27893-201ENSMUST00000184408 194 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 1700025M24Rik-203ENSMUST00000191524 725 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Ighv12-1-201ENSMUST00000195542 329 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm44060-201ENSMUST00000204440 410 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 AC134420.1-201ENSMUST00000227027 289 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.23□□□□□ -1.73
Ddb1Q3U1J4 Olfr836-202ENSMUST00000212730 5045 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Mgat4c-212ENSMUST00000179929 4272 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm6639-202ENSMUST00000196841 2666 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm3683-201ENSMUST00000175701 2513 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm14387-201ENSMUST00000121827 2055 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm24275-201ENSMUST00000116780 146 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm12255-201ENSMUST00000117184 284 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm13046-201ENSMUST00000117391 501 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm25781-201ENSMUST00000122527 84 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm24780-201ENSMUST00000157635 143 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm23411-201ENSMUST00000157988 62 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm17162-201ENSMUST00000168538 473 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Mir5129-201ENSMUST00000174938 78 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm20656-201ENSMUST00000176925 518 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm7909-201ENSMUST00000182688 614 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm44870-201ENSMUST00000207291 357 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 AC124346.1-201ENSMUST00000218539 364 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Gm33680-201ENSMUST00000219336 576 ntTSL 5 BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
Ddb1Q3U1J4 Abi3bp-204ENSMUST00000171000 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.73
Ddb1Q3U1J4 Vmn1r71-207ENSMUST00000228248 5469 ntAPPRIS P2 BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm42524-201ENSMUST00000202881 2214 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 AC124346.2-201ENSMUST00000217986 5083 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Mir294-201ENSMUST00000104710 84 ntBASIC4.21□□□□□ -1.74
Ddb1Q3U1J4 Gm22107-201ENSMUST00000122548 100 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms