Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Gm22575-201ENSMUST00000082981 110 ntBASIC2.18□□□□□ -2.06
Trim43aQ3TL54 Gm26128-201ENSMUST00000083170 110 ntBASIC2.18□□□□□ -2.06
Trim43aQ3TL54 Igkv13-87-201ENSMUST00000114214 286 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm11490-201ENSMUST00000118128 272 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm13239-201ENSMUST00000119920 637 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm25339-201ENSMUST00000157458 232 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm24237-201ENSMUST00000157790 132 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm24304-201ENSMUST00000177635 107 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm27342-201ENSMUST00000183530 109 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm42924-201ENSMUST00000197261 185 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Igkv11-114-201ENSMUST00000200013 346 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm31520-201ENSMUST00000203048 733 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm16351-202ENSMUST00000209660 337 ntTSL 5 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 AC133598.3-201ENSMUST00000224322 568 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Gm22978-201ENSMUST00000082607 160 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Mir208a-201ENSMUST00000083498 83 ntBASIC2.17□□□□□ -2.06
Trim43aQ3TL54 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm24049-201ENSMUST00000102409 100 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm12941-201ENSMUST00000117934 220 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm15896-201ENSMUST00000118045 440 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm12956-201ENSMUST00000122184 414 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Ptges3-ps-201ENSMUST00000160012 480 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm20405-201ENSMUST00000174002 229 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm25820-202ENSMUST00000197479 128 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm38405-203ENSMUST00000208548 400 ntTSL 5 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm26564-201ENSMUST00000216701 378 ntTSL 3 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Gm24254-201ENSMUST00000083702 104 ntBASIC2.16□□□□□ -2.06
Trim43aQ3TL54 Defb43-201ENSMUST00000100491 408 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm24098-201ENSMUST00000102075 109 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm25381-201ENSMUST00000102078 109 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Mir344e-201ENSMUST00000104677 66 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm11268-201ENSMUST00000118347 267 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm8217-201ENSMUST00000119136 465 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm14915-201ENSMUST00000120747 204 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm26101-201ENSMUST00000157246 105 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Klra5-204ENSMUST00000169901 792 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm23813-201ENSMUST00000175153 77 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Mir5101-201ENSMUST00000175181 83 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm8532-201ENSMUST00000179174 461 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm27942-201ENSMUST00000184669 101 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm19147-201ENSMUST00000199622 652 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm43493-201ENSMUST00000199837 202 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Mir497-201ENSMUST00000200557 84 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm44938-201ENSMUST00000208614 427 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm18242-201ENSMUST00000218455 542 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 AC124569.1-201ENSMUST00000225932 101 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC2.15□□□□□ -2.07
Trim43aQ3TL54 Gm14238-201ENSMUST00000120227 323 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm13194-201ENSMUST00000142299 311 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm23754-201ENSMUST00000157576 63 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm24010-201ENSMUST00000157731 282 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm23559-201ENSMUST00000157824 103 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm22483-201ENSMUST00000157986 274 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm23704-201ENSMUST00000158844 340 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm25368-201ENSMUST00000158847 131 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm3025-201ENSMUST00000163454 489 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm2878-201ENSMUST00000170173 486 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Vmn1r-ps58-201ENSMUST00000174460 840 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm28494-201ENSMUST00000187687 562 ntTSL 5 BASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Gm29288-201ENSMUST00000191582 901 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 AC159632.1-201ENSMUST00000221808 317 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Trim43aQ3TL54 Mir421-201ENSMUST00000083575 76 ntBASIC2.14□□□□□ -2.07
Trim43aQ3TL54 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm23691-201ENSMUST00000101878 107 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm26077-201ENSMUST00000104064 123 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm14358-201ENSMUST00000118458 403 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm13603-201ENSMUST00000119404 83 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm25488-201ENSMUST00000158728 118 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm17038-201ENSMUST00000166586 494 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Mir5129-201ENSMUST00000174938 78 ntBASIC2.13□□□□□ -2.07
Trim43aQ3TL54 Gm22264-201ENSMUST00000178200 107 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 76,532 protein–RNA pairs in 197.3 ms