Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Gm11640-201ENSMUST00000155987 272 ntTSL 3 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm26276-201ENSMUST00000157099 109 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm22792-201ENSMUST00000157225 133 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm25333-201ENSMUST00000158035 246 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm23350-201ENSMUST00000158429 103 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm17528-201ENSMUST00000171026 239 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm23816-201ENSMUST00000179617 132 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm26585-201ENSMUST00000180890 630 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm29352-201ENSMUST00000188054 544 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm37279-201ENSMUST00000194630 338 ntTSL 5 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm35931-201ENSMUST00000203931 448 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm18602-201ENSMUST00000209794 851 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 AC166343.1-201ENSMUST00000213261 577 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 AC163357.1-201ENSMUST00000220847 233 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 AC124729.1-201ENSMUST00000225327 976 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm23518-201ENSMUST00000082835 153 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 n-R5s50-201ENSMUST00000083168 111 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 CT009510.2-203ENSMUST00000226704 2136 ntBASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Olfr1467-202ENSMUST00000215096 3671 ntAPPRIS P1 TSL 5 BASIC3.71□□□□□ -1.82
Usp39Q3TIX9 Gm43870-201ENSMUST00000205102 4369 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm28465-202ENSMUST00000220779 1701 ntTSL 5 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Tfpi-202ENSMUST00000090732 3576 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 A830011K09Rik-202ENSMUST00000162868 2201 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 AC153969.1-201ENSMUST00000214047 2605 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm4736-201ENSMUST00000100870 380 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm3443-201ENSMUST00000112772 285 ntAPPRIS P1 TSL 3 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm14299-201ENSMUST00000117586 397 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm11718-201ENSMUST00000119942 537 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm12779-201ENSMUST00000121496 143 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm8880-201ENSMUST00000121800 454 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm20484-201ENSMUST00000173738 231 ntTSL 2 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Mir1251-201ENSMUST00000175486 84 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm20660-201ENSMUST00000177515 289 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm27773-201ENSMUST00000184087 78 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 1700022E09Rik-201ENSMUST00000185295 299 ntTSL 5 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm28920-201ENSMUST00000189957 699 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm42925-201ENSMUST00000197359 285 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm18540-201ENSMUST00000204025 526 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm44825-201ENSMUST00000207557 150 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm44598-201ENSMUST00000207566 150 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 AC155830.1-201ENSMUST00000220050 3836 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm23845-201ENSMUST00000083834 152 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Mrgprx2-201ENSMUST00000098433 4610 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Vmn1r52-207ENSMUST00000228394 3069 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 AC159193.2-201ENSMUST00000220865 4251 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm37792-201ENSMUST00000195761 3413 ntBASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Serpina7-201ENSMUST00000033626 2330 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Olfr1093-203ENSMUST00000219561 2124 ntAPPRIS P1 TSL 5 BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Skint4-202ENSMUST00000106564 3997 ntAPPRIS ALT2 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Skint4-204ENSMUST00000106566 3997 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
Usp39Q3TIX9 Gm17067-201ENSMUST00000166837 3673 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Olfr744-203ENSMUST00000216690 1765 ntAPPRIS P1 TSL 5 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm23697-201ENSMUST00000103897 110 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm14296-202ENSMUST00000108931 750 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm15213-201ENSMUST00000122098 216 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm22482-201ENSMUST00000122563 359 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm14298-201ENSMUST00000139032 237 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm16356-201ENSMUST00000143300 169 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm23959-201ENSMUST00000157208 324 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm25572-201ENSMUST00000157527 172 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm22849-201ENSMUST00000157713 307 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm24976-201ENSMUST00000158972 135 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm7241-201ENSMUST00000159853 357 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm17162-201ENSMUST00000168538 473 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm8114-201ENSMUST00000172225 484 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm20692-201ENSMUST00000177251 681 ntTSL 3 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Mup-ps11-201ENSMUST00000178040 545 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Mup-ps3-201ENSMUST00000178315 545 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm25360-201ENSMUST00000178786 191 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm29227-201ENSMUST00000187139 315 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm29034-201ENSMUST00000188099 315 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm37129-201ENSMUST00000195791 315 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm42453-201ENSMUST00000200477 409 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm44720-201ENSMUST00000206076 260 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm44513-201ENSMUST00000206811 439 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 AC122367.2-201ENSMUST00000220987 534 ntTSL 2 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.69□□□□□ -1.82
Usp39Q3TIX9 AC129541.1-201ENSMUST00000226940 523 ntBASIC3.69□□□□□ -1.82
Usp39Q3TIX9 Gm25200-201ENSMUST00000083094 130 ntBASIC3.69□□□□□ -1.82
Retrieved 100 of 76,532 protein–RNA pairs in 96.1 ms