Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Rpl39-ps-202ENSMUST00000146505 151 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm5958-201ENSMUST00000147698 297 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm22113-201ENSMUST00000158343 104 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm23474-201ENSMUST00000158884 75 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm26287-201ENSMUST00000158887 81 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm10357-201ENSMUST00000159886 264 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm21827-201ENSMUST00000178247 423 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Mir7578-201ENSMUST00000183455 82 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm43402-201ENSMUST00000197159 159 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm43600-201ENSMUST00000202134 223 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm18540-201ENSMUST00000204025 526 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm45498-201ENSMUST00000210346 283 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm35552-201ENSMUST00000214355 396 ntTSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 AC145736.2-201ENSMUST00000216305 365 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Olfr814-203ENSMUST00000216966 3819 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm23625-201ENSMUST00000082457 100 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm26066-201ENSMUST00000083385 109 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm15292-201ENSMUST00000098895 385 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col8a1Q00780 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Abca16-201ENSMUST00000056042 5085 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Col8a1Q00780 Phf11c-201ENSMUST00000166912 3459 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Col8a1Q00780 Gm32444-201ENSMUST00000195147 3511 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Col8a1Q00780 AC101945.4-201ENSMUST00000228464 1976 ntBASIC3.62□□□□□ -1.83
Col8a1Q00780 Akap4-201ENSMUST00000057101 2851 ntAPPRIS P4 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 AC153526.2-201ENSMUST00000218206 2031 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr1205-202ENSMUST00000215929 6149 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 Olr1-201ENSMUST00000032265 3572 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 A230057D06Rik-203ENSMUST00000208953 3357 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm37862-201ENSMUST00000193079 2533 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Igkv5-45-201ENSMUST00000103366 385 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm15846-201ENSMUST00000116022 320 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm12719-201ENSMUST00000118859 241 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm14694-201ENSMUST00000121856 282 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm5123-201ENSMUST00000121905 837 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 A630050E04Rik-201ENSMUST00000151443 581 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm5755-201ENSMUST00000152394 837 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm23232-201ENSMUST00000157300 105 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm28020-201ENSMUST00000157739 67 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm27510-201ENSMUST00000158214 64 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm21893-201ENSMUST00000179119 397 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm27249-201ENSMUST00000185049 328 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm28978-201ENSMUST00000191120 615 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm37624-201ENSMUST00000193751 219 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm37791-201ENSMUST00000195081 286 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 LOC667541-201ENSMUST00000223408 278 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm9795-201ENSMUST00000062156 693 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm26204-201ENSMUST00000082906 107 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm23041-201ENSMUST00000083868 106 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Col8a1Q00780 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm44542-201ENSMUST00000208677 4314 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm8995-201ENSMUST00000184842 7280 ntBASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Col8a1Q00780 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Acsm3-202ENSMUST00000106526 2704 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col8a1Q00780 AC144772.3-201ENSMUST00000228829 3126 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr801-204ENSMUST00000216067 4014 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col8a1Q00780 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Col8a1Q00780 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Igkv17-127-201ENSMUST00000103309 341 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm8666-201ENSMUST00000117517 292 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm15002-201ENSMUST00000118406 452 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm11598-201ENSMUST00000119257 357 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm15029-201ENSMUST00000119742 199 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Mup-ps20-201ENSMUST00000121132 389 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm23496-201ENSMUST00000157741 248 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm3370-201ENSMUST00000171785 500 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm22120-201ENSMUST00000175590 70 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm24487-201ENSMUST00000178017 63 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm5329-201ENSMUST00000186898 463 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Trdv1-202ENSMUST00000187163 334 ntAPPRIS ALT2 BASIC3.6□□□□□ -1.83
Col8a1Q00780 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm43427-201ENSMUST00000198188 331 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Gm43749-201ENSMUST00000199345 352 ntBASIC3.6□□□□□ -1.83
Col8a1Q00780 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC3.6□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 85.6 ms