Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm44472-201ENSMUST00000204922 943 ntBASIC3.18□□□□□ -1.9
CiitaP79621 4930402F11Rik-202ENSMUST00000207781 1178 ntTSL 5 BASIC3.18□□□□□ -1.9
CiitaP79621 AC112274.2-201ENSMUST00000218436 170 ntBASIC3.18□□□□□ -1.9
CiitaP79621 AC120553.1-201ENSMUST00000227313 260 ntBASIC3.18□□□□□ -1.9
CiitaP79621 CT030704.1-201ENSMUST00000227521 699 ntBASIC3.18□□□□□ -1.9
CiitaP79621 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.18□□□□□ -1.9
CiitaP79621 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CiitaP79621 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CiitaP79621 Zfp972-201ENSMUST00000081529 472 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CiitaP79621 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
CiitaP79621 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CiitaP79621 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC3.17□□□□□ -1.9
CiitaP79621 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CiitaP79621 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CiitaP79621 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CiitaP79621 Olfr1461-202ENSMUST00000207113 3481 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CiitaP79621 Gm22658-201ENSMUST00000104196 155 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm22771-201ENSMUST00000104449 91 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm13085-201ENSMUST00000118356 171 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm5937-201ENSMUST00000119715 643 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm16021-201ENSMUST00000121176 219 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm15167-201ENSMUST00000121997 187 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm14804-201ENSMUST00000122322 508 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm13602-201ENSMUST00000122405 493 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.17□□□□□ -1.9
CiitaP79621 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CiitaP79621 Gm23325-201ENSMUST00000157422 129 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm26215-201ENSMUST00000158584 139 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm17166-201ENSMUST00000172006 431 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm22633-201ENSMUST00000179834 107 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm27700-201ENSMUST00000185003 81 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm27919-201ENSMUST00000185163 107 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm28925-201ENSMUST00000188586 168 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Trbv24-201ENSMUST00000194614 347 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm43521-201ENSMUST00000197838 255 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm43107-201ENSMUST00000198729 255 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.17□□□□□ -1.9
CiitaP79621 AC134334.1-201ENSMUST00000214277 255 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Olfr941-ps1-201ENSMUST00000215258 935 ntBASIC3.17□□□□□ -1.9
CiitaP79621 AL935138.1-201ENSMUST00000215309 196 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.17□□□□□ -1.9
CiitaP79621 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CiitaP79621 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
CiitaP79621 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.17□□□□□ -1.9
CiitaP79621 Gm22249-201ENSMUST00000082485 136 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Gm24150-201ENSMUST00000082759 104 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Mir208a-201ENSMUST00000083498 83 ntBASIC3.17□□□□□ -1.9
CiitaP79621 Defa25-201ENSMUST00000095425 279 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CiitaP79621 Vmn1r79-203ENSMUST00000227530 5581 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CiitaP79621 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Mgat4c-201ENSMUST00000020039 3735 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CiitaP79621 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CiitaP79621 Gm13804-201ENSMUST00000119552 172 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm11410-201ENSMUST00000120053 1143 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm11849-201ENSMUST00000121293 261 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm14736-201ENSMUST00000121470 336 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm14765-201ENSMUST00000121954 326 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm14775-201ENSMUST00000122089 310 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Gm22555-201ENSMUST00000157801 62 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm26088-201ENSMUST00000157896 131 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm22611-201ENSMUST00000158288 150 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm17538-201ENSMUST00000168236 327 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm27245-201ENSMUST00000184385 376 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm19193-201ENSMUST00000190263 590 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CiitaP79621 Gm44818-201ENSMUST00000206608 358 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.16□□□□□ -1.9
CiitaP79621 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.16□□□□□ -1.9
CiitaP79621 Gm10717-201ENSMUST00000075573 684 ntTSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Olfr1099-201ENSMUST00000099871 1031 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CiitaP79621 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
CiitaP79621 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
CiitaP79621 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
CiitaP79621 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CiitaP79621 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CiitaP79621 Gm12386-201ENSMUST00000117380 688 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm14971-201ENSMUST00000117980 663 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm12878-201ENSMUST00000118744 332 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm15272-201ENSMUST00000120865 233 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm16428-201ENSMUST00000121193 723 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm6265-201ENSMUST00000149263 231 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Mir3965-201ENSMUST00000175570 69 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm24019-201ENSMUST00000178620 107 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm26243-201ENSMUST00000179260 107 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
CiitaP79621 Gm23379-201ENSMUST00000180026 107 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Mir6916-201ENSMUST00000184514 63 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm18296-201ENSMUST00000192475 783 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm37029-201ENSMUST00000195773 239 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm19202-201ENSMUST00000198096 808 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.15□□□□□ -1.91
CiitaP79621 Gm44526-201ENSMUST00000204664 121 ntBASIC3.15□□□□□ -1.91
CiitaP79621 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC3.15□□□□□ -1.91
CiitaP79621 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.15□□□□□ -1.91
CiitaP79621 4930455B14Rik-203ENSMUST00000223613 640 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 76,532 protein–RNA pairs in 88.8 ms