Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Gm25264-201ENSMUST00000158519 117 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm22308-201ENSMUST00000177609 107 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm27520-201ENSMUST00000184872 81 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm36946-201ENSMUST00000192706 435 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm43855-201ENSMUST00000197462 507 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Olfr437-202ENSMUST00000205175 2952 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rfx1P48377 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.86□□□□□ -1.63
Rfx1P48377 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC4.86□□□□□ -1.63
Rfx1P48377 Gm44853-201ENSMUST00000209070 250 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 AC154262.1-201ENSMUST00000225976 286 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 AC164100.1-201ENSMUST00000227214 508 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 AC113031.4-201ENSMUST00000228381 514 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 mt-Ti-201ENSMUST00000082393 69 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm23625-201ENSMUST00000082457 100 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm22997-201ENSMUST00000082845 107 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Gm22826-201ENSMUST00000083774 165 ntBASIC4.86□□□□□ -1.63
Rfx1P48377 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rfx1P48377 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Rfx1P48377 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.86□□□□□ -1.63
Rfx1P48377 A630033H20Rik-205ENSMUST00000167673 3044 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Rfx1P48377 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Rfx1P48377 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Rfx1P48377 AC154329.1-201ENSMUST00000224408 3129 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Olfr661-202ENSMUST00000214876 3790 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Rfx1P48377 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Rfx1P48377 Gm14816-201ENSMUST00000117174 294 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm15211-201ENSMUST00000118932 528 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm12071-201ENSMUST00000121968 469 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm25808-201ENSMUST00000122784 284 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm23171-201ENSMUST00000157159 264 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm26320-201ENSMUST00000157742 306 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm22654-201ENSMUST00000157874 105 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Mir1947-201ENSMUST00000158235 85 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Slco1a4-203ENSMUST00000165990 3823 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Rfx1P48377 Gm9376-201ENSMUST00000171107 729 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Rfx1P48377 Gm17186-201ENSMUST00000171742 456 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Obox3-ps7-201ENSMUST00000176465 410 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Snora15-201ENSMUST00000177461 131 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm20257-202ENSMUST00000188643 130 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm8599-201ENSMUST00000193033 457 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm28724-202ENSMUST00000194218 295 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm17887-201ENSMUST00000200194 547 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm45150-201ENSMUST00000206051 467 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm45273-201ENSMUST00000211559 281 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm46998-201ENSMUST00000221444 330 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Gm22571-201ENSMUST00000082984 70 ntBASIC4.85□□□□□ -1.63
Rfx1P48377 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Rfx1P48377 Gmnc-201ENSMUST00000089832 4083 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Rfx1P48377 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Rfx1P48377 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Rfx1P48377 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Rfx1P48377 4921501E09Rik-201ENSMUST00000024121 3916 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
Rfx1P48377 Ntrk3-201ENSMUST00000039431 19703 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Rfx1P48377 Olfr706-202ENSMUST00000213918 4828 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Rfx1P48377 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Fam19a1-202ENSMUST00000122120 3252 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Rfx1P48377 Trav15-1-dv6-1-201ENSMUST00000103653 349 ntAPPRIS ALT2 BASIC4.84□□□□□ -1.63
Rfx1P48377 Gm23608-201ENSMUST00000104545 128 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Gm15010-201ENSMUST00000117153 407 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Gm15215-201ENSMUST00000117773 489 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Gm14916-201ENSMUST00000121904 204 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Gm29094-201ENSMUST00000138109 664 ntAPPRIS P1 TSL 4 BASIC4.84□□□□□ -1.63
Rfx1P48377 Gm25384-201ENSMUST00000157807 105 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Gm44032-201ENSMUST00000204841 166 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 AC155830.1-201ENSMUST00000220050 3836 ntBASIC4.84□□□□□ -1.63
Rfx1P48377 Defb40-201ENSMUST00000066258 389 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Rfx1P48377 Gm38240-201ENSMUST00000195110 2487 ntBASIC4.84□□□□□ -1.64
Rfx1P48377 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm43658-201ENSMUST00000202348 4176 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Foxp2-203ENSMUST00000115470 2692 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Rfx1P48377 Gm13762-201ENSMUST00000144908 2612 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Rfx1P48377 Gm24172-201ENSMUST00000104127 117 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm24338-201ENSMUST00000104205 127 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Gm23232-201ENSMUST00000157300 105 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm23258-201ENSMUST00000158319 106 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm25605-201ENSMUST00000158364 124 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm24224-201ENSMUST00000158828 258 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Gm17100-201ENSMUST00000168963 272 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Mup-ps11-201ENSMUST00000178040 545 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Mup-ps3-201ENSMUST00000178315 545 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm29064-201ENSMUST00000187014 813 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC4.83□□□□□ -1.64
Rfx1P48377 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Gm45031-201ENSMUST00000206800 288 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 AC129219.3-201ENSMUST00000223790 196 ntBASIC4.83□□□□□ -1.64
Rfx1P48377 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Rfx1P48377 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Rfx1P48377 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Rfx1P48377 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Rfx1P48377 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 83.5 ms