Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm25466-201ENSMUST00000103995 132 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm22591-201ENSMUST00000104243 106 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm12386-201ENSMUST00000117380 688 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm16171-201ENSMUST00000118004 324 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm12876-201ENSMUST00000120975 408 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm8880-201ENSMUST00000121800 454 ntBASIC3.22□□□□□ -1.89
Traf1P39428 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Traf1P39428 Gm15961-201ENSMUST00000156090 266 ntTSL 3 BASIC3.22□□□□□ -1.89
Traf1P39428 Gm24443-201ENSMUST00000157242 132 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm22290-201ENSMUST00000177655 107 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm22583-201ENSMUST00000178031 107 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm24264-201ENSMUST00000179835 94 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm27470-201ENSMUST00000184070 210 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Olfr289-ps1-201ENSMUST00000192834 369 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm18692-201ENSMUST00000193047 511 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC3.22□□□□□ -1.89
Traf1P39428 Gm43355-201ENSMUST00000196541 346 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Igkv15-97-201ENSMUST00000197637 339 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC3.22□□□□□ -1.89
Traf1P39428 AC158803.1-201ENSMUST00000219495 316 ntBASIC3.22□□□□□ -1.89
Traf1P39428 4930567K20Rik-204ENSMUST00000220270 445 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Traf1P39428 AC165146.1-201ENSMUST00000223777 900 ntBASIC3.22□□□□□ -1.89
Traf1P39428 AC154527.5-201ENSMUST00000224448 496 ntBASIC3.22□□□□□ -1.89
Traf1P39428 AC123860.1-201ENSMUST00000228033 481 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Defb10-201ENSMUST00000054162 298 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Traf1P39428 Snora23-201ENSMUST00000082517 184 ntBASIC3.22□□□□□ -1.89
Traf1P39428 Csn1s1-205ENSMUST00000197631 1359 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Traf1P39428 Muc16-204ENSMUST00000208663 25437 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Traf1P39428 Olfr116-202ENSMUST00000216128 4477 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Traf1P39428 Mir344c-201ENSMUST00000103919 92 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm11389-201ENSMUST00000121407 430 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm14333-201ENSMUST00000130484 264 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm12272-201ENSMUST00000138136 333 ntTSL 5 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm25153-201ENSMUST00000157118 156 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm23619-201ENSMUST00000178411 94 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm25474-201ENSMUST00000179052 94 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm22047-201ENSMUST00000179176 94 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm25528-201ENSMUST00000180264 132 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm28595-201ENSMUST00000186223 437 ntTSL 5 BASIC3.21□□□□□ -1.9
Traf1P39428 Fam122c-203ENSMUST00000186314 898 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm28474-201ENSMUST00000188501 315 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm28384-201ENSMUST00000189079 463 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm44282-201ENSMUST00000203199 190 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm32531-201ENSMUST00000209324 373 ntTSL 3 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm18160-201ENSMUST00000214279 827 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm20304-201ENSMUST00000218168 444 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Gm2436-201ENSMUST00000219562 774 ntBASIC3.21□□□□□ -1.9
Traf1P39428 AC156560.1-201ENSMUST00000221425 256 ntBASIC3.21□□□□□ -1.9
Traf1P39428 AC125223.1-203ENSMUST00000225304 498 ntBASIC3.21□□□□□ -1.9
Traf1P39428 AC132918.1-201ENSMUST00000227877 925 ntBASIC3.21□□□□□ -1.9
Traf1P39428 AC131029.2-202ENSMUST00000228430 496 ntBASIC3.21□□□□□ -1.9
Traf1P39428 AC117202.3-201ENSMUST00000228532 310 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Vmn1r229-201ENSMUST00000076759 921 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm9174-201ENSMUST00000078149 255 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
Traf1P39428 Gm23503-201ENSMUST00000083903 107 ntBASIC3.21□□□□□ -1.9
Traf1P39428 Vmn1r87-201ENSMUST00000094827 888 ntAPPRIS P1 BASIC3.21□□□□□ -1.9
Traf1P39428 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
Traf1P39428 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Traf1P39428 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Traf1P39428 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC3.2□□□□□ -1.9
Traf1P39428 2610300M13Rik-202ENSMUST00000203716 1787 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Traf1P39428 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Traf1P39428 Gm13806-201ENSMUST00000117822 325 ntBASIC3.2□□□□□ -1.9
Traf1P39428 AA413626-201ENSMUST00000121125 494 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Traf1P39428 Gm22563-201ENSMUST00000157333 269 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm24291-201ENSMUST00000157633 162 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm9593-201ENSMUST00000166034 469 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm3111-201ENSMUST00000167426 490 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm17064-201ENSMUST00000167690 452 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Traf1P39428 Mir3092-201ENSMUST00000174954 96 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Traf1P39428 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Traf1P39428 Mir7013-201ENSMUST00000183540 72 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Mir6917-201ENSMUST00000184111 61 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm29550-201ENSMUST00000185543 285 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm29263-201ENSMUST00000188718 463 ntBASIC3.2□□□□□ -1.9
Traf1P39428 1700019A02Rik-202ENSMUST00000190748 726 ntAPPRIS ALT2 TSL 3 BASIC3.2□□□□□ -1.9
Traf1P39428 Gm43470-202ENSMUST00000198573 227 ntTSL 3 BASIC3.2□□□□□ -1.9
Traf1P39428 Gm15235-201ENSMUST00000200572 194 ntBASIC3.2□□□□□ -1.9
Traf1P39428 AC171206.2-201ENSMUST00000215252 389 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Gm5471-201ENSMUST00000072732 337 ntBASIC3.2□□□□□ -1.9
Traf1P39428 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.2□□□□□ -1.9
Traf1P39428 AC164164.1-201ENSMUST00000223245 2340 ntBASIC3.2□□□□□ -1.9
Traf1P39428 A330044P14Rik-201ENSMUST00000176108 2706 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Traf1P39428 Gm43780-201ENSMUST00000196510 3600 ntBASIC3.19□□□□□ -1.9
Traf1P39428 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.19□□□□□ -1.9
Traf1P39428 Gm17146-201ENSMUST00000108464 372 ntTSL 3 BASIC3.19□□□□□ -1.9
Traf1P39428 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC3.19□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85 ms