Protein–RNA interactions for Protein: P28700

Rxra, Retinoic acid receptor RXR-alpha, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxraP28700 Gm13656-201ENSMUST00000123829 345 ntTSL 3 BASIC3.33□□□□□ -1.88
RxraP28700 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.33□□□□□ -1.88
RxraP28700 Prlr-205ENSMUST00000128921 3836 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
RxraP28700 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
RxraP28700 Gm19932-201ENSMUST00000177033 313 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm18588-201ENSMUST00000177308 492 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm22910-201ENSMUST00000178568 132 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.33□□□□□ -1.88
RxraP28700 Gm37455-201ENSMUST00000191993 529 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC3.33□□□□□ -1.88
RxraP28700 Gm6510-201ENSMUST00000195916 574 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm44425-201ENSMUST00000203739 429 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm43884-201ENSMUST00000204251 559 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm38997-201ENSMUST00000205669 304 ntTSL 5 BASIC3.33□□□□□ -1.88
RxraP28700 Gm44633-201ENSMUST00000205925 439 ntTSL 3 BASIC3.33□□□□□ -1.88
RxraP28700 Gm45686-201ENSMUST00000210259 460 ntTSL 5 BASIC3.33□□□□□ -1.88
RxraP28700 Gm7692-201ENSMUST00000213534 409 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm7495-201ENSMUST00000215099 426 ntBASIC3.33□□□□□ -1.88
RxraP28700 Gm5374-201ENSMUST00000222868 657 ntBASIC3.33□□□□□ -1.88
RxraP28700 AC159619.2-201ENSMUST00000222924 401 ntBASIC3.33□□□□□ -1.88
RxraP28700 Spag11b-201ENSMUST00000039075 342 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
RxraP28700 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
RxraP28700 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
RxraP28700 Cp-202ENSMUST00000091309 4029 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
RxraP28700 Igkv1-110-201ENSMUST00000103321 401 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RxraP28700 Traj24-201ENSMUST00000103717 63 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
RxraP28700 Gm15399-201ENSMUST00000118055 724 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm12458-201ENSMUST00000119387 495 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm14647-201ENSMUST00000119392 680 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm14581-201ENSMUST00000121726 198 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 Gm26275-201ENSMUST00000157101 268 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm25572-201ENSMUST00000157527 172 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm25220-201ENSMUST00000157546 95 ntBASIC3.32□□□□□ -1.88
RxraP28700 Mir1934-201ENSMUST00000158127 83 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm10075-201ENSMUST00000162030 545 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm17072-201ENSMUST00000166673 658 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm24819-201ENSMUST00000175094 166 ntBASIC3.32□□□□□ -1.88
RxraP28700 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Mir6914-201ENSMUST00000184999 69 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm21858-202ENSMUST00000185713 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Gm21409-201ENSMUST00000186110 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Gm29064-201ENSMUST00000187014 813 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm28069-201ENSMUST00000189926 214 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Gm37281-201ENSMUST00000192412 439 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm38167-201ENSMUST00000195704 1178 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm43083-201ENSMUST00000199594 476 ntBASIC3.32□□□□□ -1.88
RxraP28700 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC3.32□□□□□ -1.88
RxraP28700 Gm44927-201ENSMUST00000207573 716 ntBASIC3.32□□□□□ -1.88
RxraP28700 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 AC167250.1-201ENSMUST00000213739 3813 ntBASIC3.32□□□□□ -1.88
RxraP28700 Olfr942-ps1-201ENSMUST00000215640 662 ntBASIC3.32□□□□□ -1.88
RxraP28700 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 Gm19326-201ENSMUST00000219818 326 ntBASIC3.32□□□□□ -1.88
RxraP28700 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.32□□□□□ -1.88
RxraP28700 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
RxraP28700 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC3.32□□□□□ -1.88
RxraP28700 Gm22247-201ENSMUST00000082476 131 ntBASIC3.32□□□□□ -1.88
RxraP28700 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
RxraP28700 Olfr1270-204ENSMUST00000215975 4854 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
RxraP28700 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
RxraP28700 Gm13331-201ENSMUST00000117500 448 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm14593-201ENSMUST00000119948 294 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm5287-201ENSMUST00000120666 598 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm14841-201ENSMUST00000121067 758 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm14564-201ENSMUST00000122159 294 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm14530-201ENSMUST00000122391 333 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm15700-201ENSMUST00000139791 821 ntTSL 3 BASIC3.31□□□□□ -1.88
RxraP28700 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC3.31□□□□□ -1.88
RxraP28700 Gm26414-201ENSMUST00000157674 269 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm25519-201ENSMUST00000158392 127 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm9892-201ENSMUST00000182415 992 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm28641-201ENSMUST00000187783 335 ntTSL 5 BASIC3.31□□□□□ -1.88
RxraP28700 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
RxraP28700 Gm43402-201ENSMUST00000197159 159 ntBASIC3.31□□□□□ -1.88
RxraP28700 Rpl18a-ps3-201ENSMUST00000198938 171 ntBASIC3.31□□□□□ -1.88
RxraP28700 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm44353-201ENSMUST00000200618 138 ntBASIC3.31□□□□□ -1.88
RxraP28700 Igkv1-136-201ENSMUST00000200635 297 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm45080-201ENSMUST00000206648 283 ntBASIC3.31□□□□□ -1.88
RxraP28700 Olfr1285-201ENSMUST00000208523 903 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm29809-201ENSMUST00000218423 493 ntBASIC3.31□□□□□ -1.88
RxraP28700 AC167229.1-201ENSMUST00000220057 469 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm21007-201ENSMUST00000221024 326 ntBASIC3.31□□□□□ -1.88
RxraP28700 Gm40548-201ENSMUST00000223522 644 ntTSL 3 BASIC3.31□□□□□ -1.88
RxraP28700 AC091783.5-201ENSMUST00000224928 671 ntBASIC3.31□□□□□ -1.88
RxraP28700 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RxraP28700 AC144628.2-201ENSMUST00000227374 352 ntBASIC3.31□□□□□ -1.88
RxraP28700 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
RxraP28700 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.31□□□□□ -1.88
RxraP28700 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RxraP28700 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
RxraP28700 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
RxraP28700 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
RxraP28700 Olfr1211-204ENSMUST00000215205 4220 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 87.7 ms