Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rpl31-ps2-201ENSMUST00000223231 343 ntBASIC3.2□□□□□ -1.9
BdnfP21237 AC160962.2-201ENSMUST00000224761 632 ntBASIC3.2□□□□□ -1.9
BdnfP21237 Skint11-201ENSMUST00000079915 820 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BdnfP21237 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BdnfP21237 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
BdnfP21237 Gm29730-201ENSMUST00000192986 1396 ntBASIC3.2□□□□□ -1.9
BdnfP21237 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
BdnfP21237 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
BdnfP21237 Gm36989-201ENSMUST00000193225 2160 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm43540-201ENSMUST00000196320 3848 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Dst-211ENSMUST00000183034 23201 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 n-R5s202-201ENSMUST00000104517 114 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Mir1193-201ENSMUST00000116761 121 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 Gm15014-201ENSMUST00000120742 258 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm11556-201ENSMUST00000120751 288 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm23429-201ENSMUST00000122486 149 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 Cdrt4os2-201ENSMUST00000128675 494 ntTSL 2 BASIC3.19□□□□□ -1.9
BdnfP21237 Gm25860-201ENSMUST00000158252 126 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm24056-201ENSMUST00000158617 146 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm23379-201ENSMUST00000180026 107 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28838-201ENSMUST00000186338 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm29635-201ENSMUST00000187221 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm29026-201ENSMUST00000187787 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28797-201ENSMUST00000188543 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28855-201ENSMUST00000188680 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28705-201ENSMUST00000189548 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28939-201ENSMUST00000190351 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm28223-201ENSMUST00000190469 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm29092-201ENSMUST00000190768 315 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm30341-201ENSMUST00000194363 289 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm43227-201ENSMUST00000202239 677 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC3.19□□□□□ -1.9
BdnfP21237 5430401H09Rik-201ENSMUST00000218145 1076 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BdnfP21237 LOC667541-201ENSMUST00000223408 278 ntBASIC3.19□□□□□ -1.9
BdnfP21237 AC154271.1-201ENSMUST00000224780 383 ntBASIC3.19□□□□□ -1.9
BdnfP21237 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
BdnfP21237 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC3.19□□□□□ -1.9
BdnfP21237 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
BdnfP21237 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.19□□□□□ -1.9
BdnfP21237 Gm10298-201ENSMUST00000074801 265 ntBASIC3.19□□□□□ -1.9
BdnfP21237 Mup1-201ENSMUST00000084548 776 ntAPPRIS ALT2 TSL 3 BASIC3.19□□□□□ -1.9
BdnfP21237 Olfr364-ps1-203ENSMUST00000217298 2894 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 Olfr136-202ENSMUST00000208525 2534 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
BdnfP21237 AC153967.1-201ENSMUST00000219333 3190 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm19541-201ENSMUST00000184488 2868 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
BdnfP21237 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BdnfP21237 Zfp932-207ENSMUST00000187241 1581 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
BdnfP21237 Gm11221-201ENSMUST00000117230 597 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm12806-201ENSMUST00000119384 268 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm14766-201ENSMUST00000121689 367 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm25105-201ENSMUST00000122477 130 ntBASIC3.18□□□□□ -1.9
BdnfP21237 n-R5s32-201ENSMUST00000122495 103 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Rps15a-ps5-201ENSMUST00000132586 393 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm24998-201ENSMUST00000157908 89 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm24878-201ENSMUST00000158782 104 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Mir6385-201ENSMUST00000184295 105 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm28437-201ENSMUST00000190277 783 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm44839-201ENSMUST00000206590 241 ntTSL 5 BASIC3.18□□□□□ -1.9
BdnfP21237 Olfr505-ps1-201ENSMUST00000207626 976 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC153141.1-201ENSMUST00000218636 501 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC161254.1-201ENSMUST00000220310 3842 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm7119-201ENSMUST00000221345 695 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC166830.1-201ENSMUST00000224201 533 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC108945.1-201ENSMUST00000226477 94 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Gm26263-201ENSMUST00000083281 164 ntBASIC3.18□□□□□ -1.9
BdnfP21237 AC117226.1-201ENSMUST00000221635 3737 ntBASIC3.18□□□□□ -1.9
BdnfP21237 Vmn1r172-202ENSMUST00000173101 9109 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
BdnfP21237 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BdnfP21237 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
BdnfP21237 Gm9696-201ENSMUST00000094227 3050 ntTSL 2 BASIC3.17□□□□□ -1.9
BdnfP21237 Clec1b-202ENSMUST00000112079 455 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
BdnfP21237 Gm24438-201ENSMUST00000157893 115 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm17072-201ENSMUST00000166673 658 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Mir5099-201ENSMUST00000175257 74 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
BdnfP21237 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
BdnfP21237 Gm27490-201ENSMUST00000184754 128 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm19193-201ENSMUST00000190263 590 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm18692-201ENSMUST00000193047 511 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Ighv12-1-201ENSMUST00000195542 329 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm43286-201ENSMUST00000197420 424 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm43529-201ENSMUST00000199178 412 ntBASIC3.17□□□□□ -1.9
BdnfP21237 AC159203.2-201ENSMUST00000221326 193 ntBASIC3.17□□□□□ -1.9
BdnfP21237 AC136976.1-201ENSMUST00000221440 381 ntTSL 3 BASIC3.17□□□□□ -1.9
BdnfP21237 Gm25202-201ENSMUST00000082838 191 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm22443-201ENSMUST00000082890 107 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Gm25630-201ENSMUST00000084000 162 ntBASIC3.17□□□□□ -1.9
BdnfP21237 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
BdnfP21237 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
BdnfP21237 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
BdnfP21237 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
BdnfP21237 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.17□□□□□ -1.9
BdnfP21237 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 85.7 ms