Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm42818-201ENSMUST00000198869 987 ntBASIC2.28□□□□□ -2.04
P20040 Gm18635-201ENSMUST00000199020 1060 ntBASIC2.28□□□□□ -2.04
P20040 Gm43284-201ENSMUST00000200103 253 ntBASIC2.28□□□□□ -2.04
P20040 Igkv1-136-201ENSMUST00000200635 297 ntBASIC2.28□□□□□ -2.04
P20040 Gm43810-201ENSMUST00000201018 232 ntBASIC2.28□□□□□ -2.04
P20040 Gm45101-201ENSMUST00000208327 232 ntBASIC2.28□□□□□ -2.04
P20040 Gm45452-201ENSMUST00000210905 177 ntBASIC2.28□□□□□ -2.04
P20040 AC162931.1-201ENSMUST00000214184 267 ntBASIC2.28□□□□□ -2.04
P20040 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
P20040 CT572985.2-201ENSMUST00000220496 211 ntBASIC2.28□□□□□ -2.04
P20040 AC126440.1-201ENSMUST00000227098 349 ntBASIC2.28□□□□□ -2.04
P20040 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.28□□□□□ -2.04
P20040 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.28□□□□□ -2.04
P20040 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
P20040 Olfr235-201ENSMUST00000073507 1079 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
P20040 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
P20040 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
P20040 4930430A15Rik-201ENSMUST00000028577 1840 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
P20040 Gm37479-201ENSMUST00000194169 3841 ntBASIC2.28□□□□□ -2.04
P20040 Olfr1463-202ENSMUST00000207246 2315 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
P20040 Olfr110-201ENSMUST00000168318 1639 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.05
P20040 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
P20040 Rgs18-201ENSMUST00000027603 2031 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
P20040 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
P20040 Mir344c-201ENSMUST00000103919 92 ntBASIC2.27□□□□□ -2.05
P20040 Gm12044-201ENSMUST00000120335 213 ntBASIC2.27□□□□□ -2.05
P20040 Gm5287-201ENSMUST00000120666 598 ntBASIC2.27□□□□□ -2.05
P20040 Gm8880-201ENSMUST00000121800 454 ntBASIC2.27□□□□□ -2.05
P20040 Gm25270-201ENSMUST00000122606 138 ntBASIC2.27□□□□□ -2.05
P20040 Gm15008-201ENSMUST00000147429 460 ntTSL 3 BASIC2.27□□□□□ -2.05
P20040 Gm23980-201ENSMUST00000157135 158 ntBASIC2.27□□□□□ -2.05
P20040 Gm23137-201ENSMUST00000157559 107 ntBASIC2.27□□□□□ -2.05
P20040 Gm26406-201ENSMUST00000158503 124 ntBASIC2.27□□□□□ -2.05
P20040 Hmgb3-ps-201ENSMUST00000162465 601 ntBASIC2.27□□□□□ -2.05
P20040 Eif3s6-ps2-201ENSMUST00000163304 219 ntBASIC2.27□□□□□ -2.05
P20040 Vmn1r-ps83-201ENSMUST00000172677 705 ntBASIC2.27□□□□□ -2.05
P20040 Vmn1r-ps142-201ENSMUST00000175707 852 ntBASIC2.27□□□□□ -2.05
P20040 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.27□□□□□ -2.05
P20040 Gm9944-201ENSMUST00000177649 309 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
P20040 Gm23568-201ENSMUST00000177960 92 ntBASIC2.27□□□□□ -2.05
P20040 Gm24829-201ENSMUST00000179245 92 ntBASIC2.27□□□□□ -2.05
P20040 Mir7081-201ENSMUST00000184490 75 ntBASIC2.27□□□□□ -2.05
P20040 Gm28560-201ENSMUST00000186091 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm28334-201ENSMUST00000186653 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm28495-201ENSMUST00000188452 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm28232-201ENSMUST00000188683 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm28481-201ENSMUST00000189231 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm29059-201ENSMUST00000191534 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm37765-201ENSMUST00000192395 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm37237-201ENSMUST00000192893 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm36968-201ENSMUST00000193737 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm37807-201ENSMUST00000194310 190 ntBASIC2.27□□□□□ -2.05
P20040 Gm38290-201ENSMUST00000195238 315 ntBASIC2.27□□□□□ -2.05
P20040 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC2.27□□□□□ -2.05
P20040 Gm43232-201ENSMUST00000201346 364 ntBASIC2.27□□□□□ -2.05
P20040 Gm44609-201ENSMUST00000207157 460 ntBASIC2.27□□□□□ -2.05
P20040 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.27□□□□□ -2.05
P20040 Gm17991-201ENSMUST00000208139 297 ntBASIC2.27□□□□□ -2.05
P20040 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC2.27□□□□□ -2.05
P20040 Gm23848-201ENSMUST00000083826 106 ntBASIC2.27□□□□□ -2.05
P20040 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
P20040 Nlrp9c-202ENSMUST00000085944 3216 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
P20040 Ccdc7b-201ENSMUST00000026912 1447 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
P20040 Mir542-201ENSMUST00000102186 85 ntBASIC2.26□□□□□ -2.05
P20040 Gm23744-201ENSMUST00000104231 149 ntBASIC2.26□□□□□ -2.05
P20040 Gm14073-201ENSMUST00000117344 381 ntBASIC2.26□□□□□ -2.05
P20040 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.26□□□□□ -2.05
P20040 Gm11556-201ENSMUST00000120751 288 ntBASIC2.26□□□□□ -2.05
P20040 Gm14821-201ENSMUST00000121975 435 ntBASIC2.26□□□□□ -2.05
P20040 Gm25220-201ENSMUST00000157546 95 ntBASIC2.26□□□□□ -2.05
P20040 Gm22611-201ENSMUST00000158288 150 ntBASIC2.26□□□□□ -2.05
P20040 Gm26214-201ENSMUST00000158581 107 ntBASIC2.26□□□□□ -2.05
P20040 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.26□□□□□ -2.05
P20040 Gm6788-201ENSMUST00000166459 270 ntBASIC2.26□□□□□ -2.05
P20040 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC2.26□□□□□ -2.05
P20040 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Mir7013-201ENSMUST00000183540 72 ntBASIC2.26□□□□□ -2.05
P20040 Mir6386-201ENSMUST00000183558 104 ntBASIC2.26□□□□□ -2.05
P20040 Mrgprb1-203ENSMUST00000188918 435 ntTSL 3 BASIC2.26□□□□□ -2.05
P20040 Gm29184-201ENSMUST00000190038 334 ntBASIC2.26□□□□□ -2.05
P20040 Gm28271-201ENSMUST00000191369 351 ntTSL 3 BASIC2.26□□□□□ -2.05
P20040 Gm43600-201ENSMUST00000202134 223 ntBASIC2.26□□□□□ -2.05
P20040 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.26□□□□□ -2.05
P20040 Gm44478-201ENSMUST00000204875 114 ntBASIC2.26□□□□□ -2.05
P20040 AC101677.1-201ENSMUST00000218590 158 ntBASIC2.26□□□□□ -2.05
P20040 AC192616.3-201ENSMUST00000220797 1124 ntBASIC2.26□□□□□ -2.05
P20040 AC117814.1-201ENSMUST00000226135 352 ntBASIC2.26□□□□□ -2.05
P20040 AC122341.1-201ENSMUST00000227291 560 ntBASIC2.26□□□□□ -2.05
P20040 Olfr1102-201ENSMUST00000055129 1063 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 Gm9174-201ENSMUST00000078149 255 ntBASIC2.26□□□□□ -2.05
P20040 mt-Co2-201ENSMUST00000082405 684 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
P20040 AC125223.3-201ENSMUST00000223588 2067 ntBASIC2.26□□□□□ -2.05
P20040 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms