Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm20542-201ENSMUST00000174582 372 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm22308-201ENSMUST00000177609 107 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm28849-201ENSMUST00000188127 174 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm28330-201ENSMUST00000190353 171 ntBASIC4.57□□□□□ -1.68
RaraP11416 Ighv1-46-201ENSMUST00000193988 351 ntBASIC4.57□□□□□ -1.68
RaraP11416 Igkv9-128-201ENSMUST00000196602 353 ntBASIC4.57□□□□□ -1.68
RaraP11416 Rpl18a-ps2-201ENSMUST00000197158 174 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm43402-201ENSMUST00000197159 159 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm44376-201ENSMUST00000197570 128 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm32222-201ENSMUST00000203296 298 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm38991-201ENSMUST00000205504 138 ntTSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 Gm44583-201ENSMUST00000207478 281 ntBASIC4.57□□□□□ -1.68
RaraP11416 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 AC105958.2-201ENSMUST00000214167 191 ntBASIC4.57□□□□□ -1.68
RaraP11416 AC153526.4-201ENSMUST00000217713 379 ntBASIC4.57□□□□□ -1.68
RaraP11416 Defb39-201ENSMUST00000075504 252 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RaraP11416 Gm26454-201ENSMUST00000082682 107 ntBASIC4.57□□□□□ -1.68
RaraP11416 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.57□□□□□ -1.68
RaraP11416 Olfr646-202ENSMUST00000214099 3778 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RaraP11416 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
RaraP11416 Pde1a-206ENSMUST00000102655 4258 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
RaraP11416 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
RaraP11416 AC091683.1-201ENSMUST00000222307 2446 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Gm43705-201ENSMUST00000195958 3717 ntBASIC4.56□□□□□ -1.68
RaraP11416 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Gm24172-201ENSMUST00000104127 117 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm26018-201ENSMUST00000104406 128 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm12797-201ENSMUST00000118645 273 ntBASIC4.56□□□□□ -1.68
RaraP11416 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm13557-201ENSMUST00000120771 382 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm22536-201ENSMUST00000158171 134 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm17052-201ENSMUST00000165496 289 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm17100-201ENSMUST00000168963 272 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm20651-201ENSMUST00000177219 329 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm22367-201ENSMUST00000178930 132 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm27016-201ENSMUST00000183294 715 ntTSL 5 BASIC4.56□□□□□ -1.68
RaraP11416 Gm28924-201ENSMUST00000190012 241 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm37878-201ENSMUST00000192108 387 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm29865-201ENSMUST00000197726 451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Gm44010-201ENSMUST00000204432 331 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm35386-201ENSMUST00000204603 629 ntTSL 3 BASIC4.56□□□□□ -1.68
RaraP11416 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.56□□□□□ -1.68
RaraP11416 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC4.56□□□□□ -1.68
RaraP11416 AC159896.1-201ENSMUST00000215264 215 ntBASIC4.56□□□□□ -1.68
RaraP11416 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
RaraP11416 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC4.56□□□□□ -1.68
RaraP11416 Gm24817-201ENSMUST00000093672 105 ntBASIC4.56□□□□□ -1.68
RaraP11416 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
RaraP11416 Vmn1r39-206ENSMUST00000228651 2144 ntAPPRIS ALT2 BASIC4.55□□□□□ -1.68
RaraP11416 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RaraP11416 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RaraP11416 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
RaraP11416 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
RaraP11416 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RaraP11416 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RaraP11416 Gm15426-201ENSMUST00000117823 556 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm11456-201ENSMUST00000121070 256 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.55□□□□□ -1.68
RaraP11416 Gm26414-201ENSMUST00000157674 269 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm24885-201ENSMUST00000158783 270 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
RaraP11416 Gm24106-201ENSMUST00000175498 127 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm23415-201ENSMUST00000175519 83 ntBASIC4.55□□□□□ -1.68
RaraP11416 Mir6907-201ENSMUST00000183764 71 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm27465-201ENSMUST00000184290 91 ntBASIC4.55□□□□□ -1.68
RaraP11416 Mir6899-201ENSMUST00000184798 64 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm29704-201ENSMUST00000196011 253 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm43955-201ENSMUST00000204332 142 ntBASIC4.55□□□□□ -1.68
RaraP11416 Olfr1304-ps1-201ENSMUST00000208032 189 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm6842-201ENSMUST00000211361 390 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm46993-201ENSMUST00000220708 259 ntBASIC4.55□□□□□ -1.68
RaraP11416 AC154636.2-201ENSMUST00000222538 161 ntBASIC4.55□□□□□ -1.68
RaraP11416 CT009713.6-201ENSMUST00000223615 294 ntBASIC4.55□□□□□ -1.68
RaraP11416 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.55□□□□□ -1.68
RaraP11416 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RaraP11416 AC165284.1-201ENSMUST00000228614 458 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm25081-201ENSMUST00000082534 108 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm26204-201ENSMUST00000082906 107 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.55□□□□□ -1.68
RaraP11416 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
RaraP11416 Gm38260-201ENSMUST00000193573 3995 ntBASIC4.55□□□□□ -1.68
RaraP11416 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
RaraP11416 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.55□□□□□ -1.68
RaraP11416 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.55□□□□□ -1.68
RaraP11416 Gm7452-202ENSMUST00000202891 3039 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm43259-201ENSMUST00000198446 3277 ntBASIC4.54□□□□□ -1.68
RaraP11416 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
RaraP11416 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
RaraP11416 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
RaraP11416 Mir465b-1-201ENSMUST00000103940 79 ntBASIC4.54□□□□□ -1.68
RaraP11416 Mir465b-2-201ENSMUST00000104662 79 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm23226-201ENSMUST00000116927 103 ntBASIC4.54□□□□□ -1.68
RaraP11416 Gm15313-201ENSMUST00000119179 282 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 117.4 ms