Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm45368-201ENSMUST00000209323 703 ntTSL 5 BASIC2.81□□□□□ -1.96
Lire1P11260 AC159475.1-201ENSMUST00000216752 411 ntTSL 5 BASIC2.81□□□□□ -1.96
Lire1P11260 CT010480.1-201ENSMUST00000223612 363 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Gm22979-201ENSMUST00000082609 159 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Olfr895-201ENSMUST00000093864 951 ntBASIC2.81□□□□□ -1.96
Lire1P11260 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
Lire1P11260 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
Lire1P11260 AC117199.1-201ENSMUST00000219940 3132 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm3563-201ENSMUST00000172963 1628 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC2.8□□□□□ -1.96
Lire1P11260 Gm13504-201ENSMUST00000117490 316 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm13602-201ENSMUST00000122405 493 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm16129-201ENSMUST00000152628 486 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC2.8□□□□□ -1.96
Lire1P11260 Gm24958-201ENSMUST00000158009 97 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm22538-201ENSMUST00000158169 299 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Vmn1r77-201ENSMUST00000164446 921 ntAPPRIS P2 BASIC2.8□□□□□ -1.96
Lire1P11260 Trav7-3-201ENSMUST00000177622 402 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lire1P11260 Trav7d-3-201ENSMUST00000179789 402 ntAPPRIS P1 BASIC2.8□□□□□ -1.96
Lire1P11260 Gm27532-201ENSMUST00000183726 113 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Mir7014-201ENSMUST00000183853 63 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm37029-201ENSMUST00000195773 239 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm19089-201ENSMUST00000197207 613 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm43393-201ENSMUST00000200147 194 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC2.8□□□□□ -1.96
Lire1P11260 CT030166.2-201ENSMUST00000222021 368 ntBASIC2.8□□□□□ -1.96
Lire1P11260 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.8□□□□□ -1.96
Lire1P11260 CT030182.3-201ENSMUST00000225986 582 ntBASIC2.8□□□□□ -1.96
Lire1P11260 Gpr22-201ENSMUST00000057783 4587 ntTSL 1 (best) BASIC2.8□□□□□ -1.96
Lire1P11260 Olfr937-202ENSMUST00000215049 2259 ntAPPRIS P1 TSL 3 BASIC2.8□□□□□ -1.96
Lire1P11260 Gm13136-201ENSMUST00000121031 2950 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm26341-201ENSMUST00000104561 134 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm6587-201ENSMUST00000120219 613 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm26477-201ENSMUST00000122617 323 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm23118-201ENSMUST00000122657 187 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Zfp950-205ENSMUST00000148569 192 ntTSL 5 BASIC2.79□□□□□ -1.96
Lire1P11260 Gm24784-201ENSMUST00000157640 62 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm26414-201ENSMUST00000157674 269 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm22187-201ENSMUST00000157819 129 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Spanxn4-201ENSMUST00000172433 424 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm28627-201ENSMUST00000186141 453 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm19891-201ENSMUST00000189771 303 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm33354-201ENSMUST00000195448 906 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm18748-201ENSMUST00000198507 622 ntBASIC2.79□□□□□ -1.96
Lire1P11260 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
Lire1P11260 AC130823.2-201ENSMUST00000226169 290 ntBASIC2.79□□□□□ -1.96
Lire1P11260 AC122393.3-201ENSMUST00000226343 1059 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm24817-201ENSMUST00000093672 105 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Gm23516-201ENSMUST00000093728 107 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.79□□□□□ -1.96
Lire1P11260 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
Lire1P11260 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.79□□□□□ -1.96
Lire1P11260 Zfp442-202ENSMUST00000185796 1833 ntTSL 5 BASIC2.79□□□□□ -1.96
Lire1P11260 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC2.78□□□□□ -1.96
Lire1P11260 Gm7853-201ENSMUST00000100708 478 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Gm13793-201ENSMUST00000124214 438 ntTSL 2 BASIC2.78□□□□□ -1.96
Lire1P11260 Gm16355-201ENSMUST00000128606 231 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
Lire1P11260 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lire1P11260 Obox4-ps39-201ENSMUST00000184306 628 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Gm5329-201ENSMUST00000186898 463 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Gm28438-201ENSMUST00000188299 345 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Gm44966-201ENSMUST00000208096 157 ntBASIC2.78□□□□□ -1.96
Lire1P11260 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC2.78□□□□□ -1.96
Lire1P11260 AC168059.2-201ENSMUST00000224473 333 ntBASIC2.78□□□□□ -1.96
Lire1P11260 AL731706.1-202ENSMUST00000226652 180 ntAPPRIS P5 BASIC2.78□□□□□ -1.96
Lire1P11260 AC113031.5-201ENSMUST00000227116 606 ntBASIC2.78□□□□□ -1.96
Lire1P11260 CT025525.2-201ENSMUST00000227743 423 ntBASIC2.78□□□□□ -1.96
Lire1P11260 Olfr1370-201ENSMUST00000058168 951 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lire1P11260 Gm10298-201ENSMUST00000074801 265 ntBASIC2.78□□□□□ -1.96
Lire1P11260 2610044O15Rik8-201ENSMUST00000079272 264 ntTSL 5 BASIC2.78□□□□□ -1.96
Lire1P11260 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Lire1P11260 Olfr24-203ENSMUST00000216754 4327 ntAPPRIS P1 TSL 2 BASIC2.78□□□□□ -1.96
Lire1P11260 Gm42445-201ENSMUST00000196996 2893 ntBASIC2.78□□□□□ -1.97
Lire1P11260 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lire1P11260 Gm24049-201ENSMUST00000102409 100 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Lire1P11260 Gm14899-201ENSMUST00000118673 548 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm16021-201ENSMUST00000121176 219 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm25961-201ENSMUST00000157174 135 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm22382-201ENSMUST00000158185 130 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm27245-201ENSMUST00000184385 376 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm27893-201ENSMUST00000184408 194 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Mir7050-201ENSMUST00000184636 60 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm37557-201ENSMUST00000191640 139 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC2.77□□□□□ -1.97
Lire1P11260 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lire1P11260 AC122225.1-201ENSMUST00000215641 369 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm35190-201ENSMUST00000222335 526 ntTSL 3 BASIC2.77□□□□□ -1.97
Lire1P11260 AC166830.1-201ENSMUST00000224201 533 ntBASIC2.77□□□□□ -1.97
Lire1P11260 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Gm6030-201ENSMUST00000078768 402 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Olfr197-201ENSMUST00000080031 926 ntBASIC2.77□□□□□ -1.97
Lire1P11260 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Lire1P11260 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Lire1P11260 Gpr174-204ENSMUST00000120971 3588 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 86.7 ms