Protein–RNA interactions for Protein: P08121

Col3a1, Collagen alpha-1(III) chain, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1P08121 AL669916.1-201ENSMUST00000217640 94 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm7540-201ENSMUST00000219764 926 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm17890-201ENSMUST00000221419 757 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm23738-201ENSMUST00000082828 171 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm23093-201ENSMUST00000083450 102 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm23851-201ENSMUST00000083831 103 ntBASIC3.33□□□□□ -1.88
Col3a1P08121 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
Col3a1P08121 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Vmn2r70-201ENSMUST00000168230 2565 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
Col3a1P08121 Gm42445-201ENSMUST00000196996 2893 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Olfr869-201ENSMUST00000213024 1783 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
Col3a1P08121 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Col3a1P08121 Mir297a-2-201ENSMUST00000103795 90 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm23803-201ENSMUST00000104610 132 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm14835-201ENSMUST00000119039 315 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm9225-201ENSMUST00000121921 836 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm26256-201ENSMUST00000122499 186 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm12226-201ENSMUST00000144172 876 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm22227-201ENSMUST00000157356 259 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Agmo-205ENSMUST00000160768 741 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Col3a1P08121 Ear-ps7-201ENSMUST00000161287 442 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC3.32□□□□□ -1.88
Col3a1P08121 Gm24810-201ENSMUST00000175317 70 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm22951-201ENSMUST00000179471 107 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC3.32□□□□□ -1.88
Col3a1P08121 Gm43494-201ENSMUST00000197672 388 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm44295-201ENSMUST00000203805 437 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm5358-201ENSMUST00000212814 353 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm3442-201ENSMUST00000216808 710 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Gm20734-201ENSMUST00000216939 193 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.32□□□□□ -1.88
Col3a1P08121 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Col3a1P08121 Gm8978-201ENSMUST00000124230 2224 ntTSL 5 BASIC3.32□□□□□ -1.88
Col3a1P08121 Vmn1r49-203ENSMUST00000226368 6276 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col3a1P08121 Pak3-203ENSMUST00000112864 8612 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col3a1P08121 Gm5935-201ENSMUST00000101667 875 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col3a1P08121 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col3a1P08121 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Col3a1P08121 Gm26396-201ENSMUST00000104093 132 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Gm22216-201ENSMUST00000157557 114 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Mir3076-201ENSMUST00000175415 60 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
Col3a1P08121 Gm24897-201ENSMUST00000179033 107 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Gm22621-201ENSMUST00000179678 74 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC3.31□□□□□ -1.88
Col3a1P08121 Serf1-201ENSMUST00000022145 601 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col3a1P08121 AL606472.1-201ENSMUST00000224628 275 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Gm22265-201ENSMUST00000082947 116 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Gm26056-201ENSMUST00000083043 104 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Gm22365-201ENSMUST00000093750 117 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col3a1P08121 Gm36962-201ENSMUST00000192114 1761 ntBASIC3.31□□□□□ -1.88
Col3a1P08121 Olfr1242-204ENSMUST00000216001 2569 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col3a1P08121 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
Col3a1P08121 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Col3a1P08121 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Col3a1P08121 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.31□□□□□ -1.88
Col3a1P08121 Gm43879-201ENSMUST00000203811 3760 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Vmn1r45-203ENSMUST00000227122 2861 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col3a1P08121 F9-201ENSMUST00000033477 2734 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col3a1P08121 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Col3a1P08121 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Col3a1P08121 Ighv15-2-201ENSMUST00000103497 351 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Col3a1P08121 Gm13331-201ENSMUST00000117500 448 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC3.3□□□□□ -1.88
Col3a1P08121 Gm22666-201ENSMUST00000158717 164 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm4468-201ENSMUST00000170206 294 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm20718-201ENSMUST00000176058 259 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm23047-201ENSMUST00000177661 94 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm26426-201ENSMUST00000177866 123 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm23141-201ENSMUST00000178682 94 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm26060-201ENSMUST00000180094 123 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm25873-201ENSMUST00000180317 107 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Trbv12-3-201ENSMUST00000192675 372 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC3.3□□□□□ -1.88
Col3a1P08121 Olfr546-ps1-201ENSMUST00000210328 326 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC3.3□□□□□ -1.88
Col3a1P08121 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col3a1P08121 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col3a1P08121 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Col3a1P08121 Zfp934-202ENSMUST00000101547 2147 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Col3a1P08121 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC3.3□□□□□ -1.88
Col3a1P08121 4921511C20Rik-201ENSMUST00000051530 1606 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Col3a1P08121 Gm38388-201ENSMUST00000195569 1430 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Ssxb8-201ENSMUST00000101690 518 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm25316-201ENSMUST00000116826 118 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm14594-201ENSMUST00000118052 537 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm14590-201ENSMUST00000118934 537 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.29□□□□□ -1.88
Col3a1P08121 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.29□□□□□ -1.88
Col3a1P08121 Gm25335-201ENSMUST00000158043 103 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm16111-201ENSMUST00000162128 285 ntBASIC3.29□□□□□ -1.88
Col3a1P08121 Gm14596-201ENSMUST00000180268 537 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 89.1 ms