Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
TnfP06804 Gm17036-201ENSMUST00000168187 254 ntTSL 3 BASIC2.35□□□□□ -2.03
TnfP06804 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm21913-201ENSMUST00000179880 1083 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TnfP06804 Mir8106-201ENSMUST00000184520 139 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm28755-201ENSMUST00000185773 199 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm17929-201ENSMUST00000186851 627 ntBASIC2.35□□□□□ -2.03
TnfP06804 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
TnfP06804 Gm35570-201ENSMUST00000198730 681 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm43901-201ENSMUST00000203247 453 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm44478-201ENSMUST00000204875 114 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.35□□□□□ -2.03
TnfP06804 Gm44555-201ENSMUST00000209008 148 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm18488-201ENSMUST00000215082 364 ntBASIC2.35□□□□□ -2.03
TnfP06804 AC111044.1-201ENSMUST00000220206 555 ntTSL 5 BASIC2.35□□□□□ -2.03
TnfP06804 CT009713.6-201ENSMUST00000223615 294 ntBASIC2.35□□□□□ -2.03
TnfP06804 Olfr820-201ENSMUST00000059244 1061 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TnfP06804 Gm10147-201ENSMUST00000075388 864 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
TnfP06804 Gm22265-201ENSMUST00000082947 116 ntBASIC2.35□□□□□ -2.03
TnfP06804 Gm24661-201ENSMUST00000083205 104 ntBASIC2.35□□□□□ -2.03
TnfP06804 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
TnfP06804 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
TnfP06804 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
TnfP06804 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
TnfP06804 Gm24126-201ENSMUST00000104111 106 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm25485-201ENSMUST00000104120 132 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm11813-201ENSMUST00000118586 291 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm15113-201ENSMUST00000119280 836 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm13482-201ENSMUST00000119842 254 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm24836-201ENSMUST00000122609 108 ntBASIC2.34□□□□□ -2.03
TnfP06804 Rpl30-206ENSMUST00000142643 505 ntTSL 2 BASIC2.34□□□□□ -2.03
TnfP06804 Gm14951-201ENSMUST00000143622 570 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
TnfP06804 Gm26280-201ENSMUST00000157096 101 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm25621-201ENSMUST00000157223 114 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm24769-201ENSMUST00000158506 129 ntBASIC2.34□□□□□ -2.03
TnfP06804 Mir3066-201ENSMUST00000175296 83 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm25874-201ENSMUST00000178030 79 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm21758-201ENSMUST00000179336 819 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm23190-201ENSMUST00000180307 64 ntBASIC2.34□□□□□ -2.03
TnfP06804 Mir7014-201ENSMUST00000183853 63 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm29647-201ENSMUST00000188795 666 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm20832-201ENSMUST00000189076 665 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm19193-201ENSMUST00000190263 590 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm28241-201ENSMUST00000190916 235 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm28504-201ENSMUST00000190977 666 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm37377-201ENSMUST00000191733 304 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm37568-201ENSMUST00000191755 364 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm31511-201ENSMUST00000193134 657 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm35843-201ENSMUST00000193716 666 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm30638-201ENSMUST00000195570 656 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm36728-201ENSMUST00000195782 665 ntBASIC2.34□□□□□ -2.03
TnfP06804 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC2.34□□□□□ -2.03
TnfP06804 Gm34701-202ENSMUST00000204685 360 ntBASIC2.34□□□□□ -2.03
TnfP06804 Olfr511-ps1-201ENSMUST00000207188 217 ntBASIC2.34□□□□□ -2.03
TnfP06804 Gm45341-201ENSMUST00000210850 1104 ntTSL 5 BASIC2.34□□□□□ -2.03
TnfP06804 AL669916.3-201ENSMUST00000213855 94 ntBASIC2.34□□□□□ -2.03
TnfP06804 AL669916.6-201ENSMUST00000214610 94 ntBASIC2.34□□□□□ -2.03
TnfP06804 AL669916.4-201ENSMUST00000215976 94 ntBASIC2.34□□□□□ -2.03
TnfP06804 AL669916.1-201ENSMUST00000217640 94 ntBASIC2.34□□□□□ -2.03
TnfP06804 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.34□□□□□ -2.03
TnfP06804 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.34□□□□□ -2.03
TnfP06804 Olfr921-201ENSMUST00000071681 1181 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
TnfP06804 Gm16261-201ENSMUST00000096813 205 ntBASIC2.34□□□□□ -2.03
TnfP06804 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.04
TnfP06804 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.34□□□□□ -2.04
TnfP06804 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.33□□□□□ -2.04
TnfP06804 Olfr894-202ENSMUST00000212992 3234 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Mir669d-201ENSMUST00000104644 121 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm15177-201ENSMUST00000120491 577 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm5646-201ENSMUST00000120568 714 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm3102-201ENSMUST00000164236 489 ntBASIC2.33□□□□□ -2.04
TnfP06804 Vmn2r-ps70-201ENSMUST00000174636 302 ntBASIC2.33□□□□□ -2.04
TnfP06804 Vmn1r-ps57-201ENSMUST00000174879 288 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Gm11168-202ENSMUST00000178077 684 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Gm22264-201ENSMUST00000178200 107 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm21726-201ENSMUST00000179654 392 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm28688-201ENSMUST00000187301 268 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm31415-201ENSMUST00000194963 344 ntTSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC2.33□□□□□ -2.04
TnfP06804 Gm43722-201ENSMUST00000196054 124 ntBASIC2.33□□□□□ -2.04
TnfP06804 Mir7118-201ENSMUST00000197760 61 ntBASIC2.33□□□□□ -2.04
TnfP06804 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm43026-201ENSMUST00000202972 325 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm44295-201ENSMUST00000203805 437 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm44554-201ENSMUST00000208738 147 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm45522-201ENSMUST00000210784 166 ntBASIC2.33□□□□□ -2.04
TnfP06804 AC155715.1-201ENSMUST00000213575 463 ntBASIC2.33□□□□□ -2.04
TnfP06804 AC105958.2-201ENSMUST00000214167 191 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm35732-201ENSMUST00000221737 356 ntTSL 3 BASIC2.33□□□□□ -2.04
TnfP06804 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.33□□□□□ -2.04
TnfP06804 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
TnfP06804 Gm24313-201ENSMUST00000082561 133 ntBASIC2.33□□□□□ -2.04
TnfP06804 Snord104-201ENSMUST00000083192 70 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm25755-201ENSMUST00000083396 107 ntBASIC2.33□□□□□ -2.04
TnfP06804 Mir222-201ENSMUST00000083537 79 ntBASIC2.33□□□□□ -2.04
TnfP06804 Gm3867-202ENSMUST00000181639 2007 ntTSL 2 BASIC2.33□□□□□ -2.04
TnfP06804 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
TnfP06804 Olfr1487-203ENSMUST00000209005 2061 ntTSL 3 BASIC2.33□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms