Protein–RNA interactions for Protein: O88609

Lmx1b, LIM homeobox transcription factor 1-beta, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmx1bO88609 Gm25621-201ENSMUST00000157223 114 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm23231-201ENSMUST00000157299 104 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm24014-201ENSMUST00000157728 157 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm24553-201ENSMUST00000158653 131 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm25369-201ENSMUST00000158848 132 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Mir5098-201ENSMUST00000175320 82 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Fam107b-206ENSMUST00000176254 300 ntTSL 5 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Mir6408-201ENSMUST00000183643 91 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm27796-201ENSMUST00000183863 261 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm27608-201ENSMUST00000184822 162 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Scgb2b16-ps-201ENSMUST00000188720 333 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm7837-201ENSMUST00000190873 412 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm28724-202ENSMUST00000194218 295 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm38088-201ENSMUST00000195829 241 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Igkv8-31-201ENSMUST00000200040 372 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm18540-201ENSMUST00000204025 526 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm44208-201ENSMUST00000205199 421 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm15927-204ENSMUST00000206075 372 ntTSL 3 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm45005-201ENSMUST00000206640 157 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm45207-201ENSMUST00000207469 145 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm45313-201ENSMUST00000210584 178 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr6-204ENSMUST00000219365 951 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm45815-201ENSMUST00000220241 146 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Snord21-201ENSMUST00000082519 94 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Mir496a-201ENSMUST00000093627 79 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm37298-201ENSMUST00000193770 3868 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm11782-201ENSMUST00000131675 2804 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.4□□□□□ -1.87
Lmx1bO88609 Chrdl1-201ENSMUST00000063029 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr1020-202ENSMUST00000215347 2640 ntAPPRIS P1 TSL 3 BASIC3.4□□□□□ -1.87
Lmx1bO88609 Olfr1079-203ENSMUST00000216480 2071 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Olfr873-205ENSMUST00000215540 3784 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm14406-201ENSMUST00000108943 531 ntTSL 2 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm12458-201ENSMUST00000119387 495 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm15926-201ENSMUST00000120492 550 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm11534-201ENSMUST00000125956 204 ntTSL 3 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm22320-201ENSMUST00000157149 312 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm26149-201ENSMUST00000157432 108 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm23120-201ENSMUST00000157654 287 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm26041-201ENSMUST00000158148 108 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Mir6372-201ENSMUST00000185114 109 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm29062-201ENSMUST00000186032 694 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lmx1bO88609 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm37343-201ENSMUST00000192542 111 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm37097-201ENSMUST00000193676 336 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm7041-201ENSMUST00000201227 524 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm44076-201ENSMUST00000203072 520 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 AC160865.1-201ENSMUST00000219873 151 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 AC125379.1-201ENSMUST00000221928 111 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm23736-201ENSMUST00000082553 75 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Snora7a-201ENSMUST00000082629 140 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Vmn1r74-202ENSMUST00000228471 6608 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Olfr1369-ps1-204ENSMUST00000215207 3794 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
Lmx1bO88609 C030005K15Rik-201ENSMUST00000166373 1882 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm15088-201ENSMUST00000117973 1508 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm15098-201ENSMUST00000119036 1508 ntBASIC3.39□□□□□ -1.87
Lmx1bO88609 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
Lmx1bO88609 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm18609-201ENSMUST00000203370 3601 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm12010-201ENSMUST00000122400 2017 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm14296-202ENSMUST00000108931 750 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm13876-201ENSMUST00000118451 261 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm8244-201ENSMUST00000121254 264 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Etaa1os-201ENSMUST00000140161 550 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm23704-201ENSMUST00000158844 340 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 2210418O10Rik-204ENSMUST00000166464 750 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm29665-201ENSMUST00000191457 528 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Ighv1-17-1-201ENSMUST00000194849 351 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Obox4-ps25-201ENSMUST00000199090 210 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm19177-201ENSMUST00000204520 613 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC3.38□□□□□ -1.87
Lmx1bO88609 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 AC124772.1-201ENSMUST00000221325 151 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm46389-201ENSMUST00000223199 392 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.38□□□□□ -1.87
Lmx1bO88609 AL645546.1-201ENSMUST00000225001 189 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Gm4987-201ENSMUST00000078326 408 ntBASIC3.38□□□□□ -1.87
Lmx1bO88609 BC100530-201ENSMUST00000096089 619 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
Lmx1bO88609 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Arhgap12-205ENSMUST00000182066 4506 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Vmn1r66-205ENSMUST00000228622 3304 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
Lmx1bO88609 Olfr1251-201ENSMUST00000214304 3133 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
Retrieved 100 of 76,532 protein–RNA pairs in 83.4 ms