Protein–RNA interactions for Protein: O54941

Smarce1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, mousemouse

Known RBP Predictions only

Length 411 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarce1O54941 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm24787-201ENSMUST00000157380 123 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm17224-201ENSMUST00000171429 500 ntTSL 3 BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm21729-201ENSMUST00000180058 664 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm21853-201ENSMUST00000180071 664 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm27527-201ENSMUST00000183903 99 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm29495-201ENSMUST00000189319 664 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm9236-201ENSMUST00000196892 587 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm42622-201ENSMUST00000197229 355 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Gm18982-201ENSMUST00000198118 529 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Smr2-204ENSMUST00000199635 680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm44472-201ENSMUST00000204922 943 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm18774-201ENSMUST00000218269 601 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 AC114575.1-201ENSMUST00000218634 353 ntTSL 3 BASIC3.3□□□□□ -1.88
Smarce1O54941 AC160984.2-201ENSMUST00000224927 791 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 AC144628.1-201ENSMUST00000227943 466 ntBASIC3.3□□□□□ -1.88
Smarce1O54941 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Smarce1O54941 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Smarce1O54941 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarce1O54941 Olfr1193-202ENSMUST00000213893 3519 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Smarce1O54941 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Olfr652-204ENSMUST00000219111 5329 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Ccdc178-202ENSMUST00000115837 2979 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smarce1O54941 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm2066-201ENSMUST00000118046 389 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm7916-201ENSMUST00000120325 456 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm22098-201ENSMUST00000157930 85 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm23068-201ENSMUST00000158239 293 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm8207-201ENSMUST00000171204 502 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm27313-201ENSMUST00000183500 142 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm27520-201ENSMUST00000184872 81 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm44520-201ENSMUST00000205447 802 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm45459-201ENSMUST00000209882 442 ntTSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm45772-201ENSMUST00000212961 240 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 AL450317.1-201ENSMUST00000213941 291 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm26228-201ENSMUST00000082512 107 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm25080-201ENSMUST00000082526 107 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm26458-201ENSMUST00000082832 128 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Gm25518-201ENSMUST00000083864 107 ntBASIC3.29□□□□□ -1.88
Smarce1O54941 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Smarce1O54941 Tcp11x2-201ENSMUST00000078605 1776 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smarce1O54941 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
Smarce1O54941 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Smarce1O54941 Olfr352-202ENSMUST00000217325 3337 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Smarce1O54941 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarce1O54941 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smarce1O54941 Esp34-202ENSMUST00000178654 1413 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smarce1O54941 Olfr609-202ENSMUST00000216075 3429 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Smarce1O54941 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarce1O54941 Gm14159-201ENSMUST00000119832 451 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm11849-201ENSMUST00000121293 261 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm25107-201ENSMUST00000122472 129 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC3.28□□□□□ -1.88
Smarce1O54941 Gm24240-201ENSMUST00000157785 135 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm27660-201ENSMUST00000184028 208 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm37281-201ENSMUST00000192412 439 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm30341-201ENSMUST00000194363 289 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm37743-201ENSMUST00000194645 376 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Gm44011-201ENSMUST00000203336 394 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Olfr185-ps1-201ENSMUST00000205894 881 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Med7-201ENSMUST00000020665 1193 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
Smarce1O54941 Gm6012-201ENSMUST00000210821 730 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 AL590503.1-201ENSMUST00000222053 321 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 AC116656.1-201ENSMUST00000227040 755 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 AC147628.1-201ENSMUST00000228193 688 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Cysltr1-201ENSMUST00000064892 1059 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Smarce1O54941 Olfr305-201ENSMUST00000069236 960 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarce1O54941 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Smarce1O54941 C630028M04Rik-201ENSMUST00000141452 3387 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
Smarce1O54941 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Smarce1O54941 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC3.28□□□□□ -1.88
Smarce1O54941 Zfp979-201ENSMUST00000037565 2558 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
Smarce1O54941 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
Smarce1O54941 Gm26147-201ENSMUST00000104479 114 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm13504-201ENSMUST00000117490 316 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm11359-201ENSMUST00000120039 567 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 AA413626-201ENSMUST00000121125 494 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm16354-201ENSMUST00000155376 150 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Olfr733-201ENSMUST00000163469 994 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
Smarce1O54941 Gm8151-201ENSMUST00000184817 871 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm7858-201ENSMUST00000190177 622 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm18964-201ENSMUST00000193013 563 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 A930014E01Rik-201ENSMUST00000194572 330 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm8041-201ENSMUST00000199755 616 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Olfr184-ps1-201ENSMUST00000205922 516 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Gm45513-201ENSMUST00000210228 376 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 Olfr1114-ps1-201ENSMUST00000213896 456 ntBASIC3.27□□□□□ -1.89
Smarce1O54941 AC155634.2-201ENSMUST00000222001 489 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms