Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm17119-201ENSMUST00000163943 280 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm9071-201ENSMUST00000165915 474 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm27511-201ENSMUST00000183502 127 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 1700040F17Rik-201ENSMUST00000187158 817 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm8403-201ENSMUST00000189712 1298 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm43083-201ENSMUST00000199594 476 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm44212-201ENSMUST00000205016 897 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 AC166060.1-201ENSMUST00000213509 425 ntTSL 5 BASIC1.5□□□□□ -2.17
Hmgb3O54879 AC155715.1-201ENSMUST00000213575 463 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 AC160031.2-201ENSMUST00000218242 274 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 AC164567.2-201ENSMUST00000219363 445 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm31849-201ENSMUST00000220306 375 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC1.5□□□□□ -2.17
Hmgb3O54879 CT010480.5-201ENSMUST00000225026 217 ntBASIC1.5□□□□□ -2.17
Hmgb3O54879 Skint2-203ENSMUST00000106560 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC1.5□□□□□ -2.17
Hmgb3O54879 Gm34240-201ENSMUST00000192500 1936 ntTSL 1 (best) BASIC1.5□□□□□ -2.17
Hmgb3O54879 Olfr630-201ENSMUST00000106880 2198 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Hmgb3O54879 Igkv17-121-201ENSMUST00000103315 350 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm13331-201ENSMUST00000117500 448 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm22843-201ENSMUST00000157710 134 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm27399-201ENSMUST00000184250 78 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Mir8106-201ENSMUST00000184520 139 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm42825-201ENSMUST00000198883 723 ntTSL 2 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm43171-201ENSMUST00000199882 291 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm45386-201ENSMUST00000210194 218 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Hmgb3O54879 AC137871.2-201ENSMUST00000226482 289 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Klra7-201ENSMUST00000032286 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC1.49□□□□□ -2.17
Hmgb3O54879 Gm23727-201ENSMUST00000083352 164 ntBASIC1.49□□□□□ -2.17
Hmgb3O54879 Vmn1r67-202ENSMUST00000226237 2352 ntAPPRIS ALT2 BASIC1.49□□□□□ -2.17
Hmgb3O54879 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm24403-201ENSMUST00000104616 130 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Mir873a-201ENSMUST00000104863 77 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Cox20-ps-201ENSMUST00000119872 353 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm13239-201ENSMUST00000119920 637 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm13602-201ENSMUST00000122405 493 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Tslrn1-201ENSMUST00000129479 747 ntTSL 3 BASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm25335-201ENSMUST00000158043 103 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Mir3075-201ENSMUST00000175340 85 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Mir7658-201ENSMUST00000184043 57 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm37692-201ENSMUST00000192633 232 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm43587-201ENSMUST00000199590 204 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm42578-201ENSMUST00000199960 194 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 AC144671.1-201ENSMUST00000215265 99 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 CT030184.1-201ENSMUST00000222393 416 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Zfp706-205ENSMUST00000228275 481 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Hmgb3O54879 Mir300-201ENSMUST00000083485 79 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm44578-201ENSMUST00000207236 3835 ntBASIC1.48□□□□□ -2.17
Hmgb3O54879 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Hmgb3O54879 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm43032-201ENSMUST00000197967 3123 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm42721-201ENSMUST00000197165 1523 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm14049-201ENSMUST00000121009 636 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 n-R5s189-201ENSMUST00000122675 114 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm16359-201ENSMUST00000124511 289 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm22793-201ENSMUST00000157227 330 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm24908-201ENSMUST00000157294 127 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm25637-201ENSMUST00000157529 107 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm22603-201ENSMUST00000157603 96 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm26487-201ENSMUST00000158022 94 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm26195-201ENSMUST00000175035 101 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm22111-201ENSMUST00000178010 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm23687-201ENSMUST00000178664 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm21775-201ENSMUST00000178669 540 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm24566-201ENSMUST00000179286 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm23305-201ENSMUST00000179342 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm26389-201ENSMUST00000179819 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm22130-201ENSMUST00000179979 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm22393-201ENSMUST00000180153 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm25085-201ENSMUST00000180298 79 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm27249-201ENSMUST00000185049 328 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm32175-201ENSMUST00000193641 346 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm5317-201ENSMUST00000204445 847 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm18410-201ENSMUST00000207199 577 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm6796-201ENSMUST00000211919 243 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Olfr861-ps1-201ENSMUST00000212783 928 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm35101-201ENSMUST00000219218 243 ntTSL 5 BASIC1.47□□□□□ -2.17
Hmgb3O54879 Cenpk-201ENSMUST00000022227 1217 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Hmgb3O54879 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Olfr1459-201ENSMUST00000078299 1102 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Hmgb3O54879 Gm25813-201ENSMUST00000082748 191 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Mir127-201ENSMUST00000093568 70 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Adam29-201ENSMUST00000053441 2726 ntAPPRIS P1 TSL 1 (best) BASIC1.47□□□□□ -2.17
Hmgb3O54879 AC169038.1-201ENSMUST00000227378 1352 ntBASIC1.47□□□□□ -2.17
Hmgb3O54879 Olfr611-202ENSMUST00000216074 2301 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Hmgb3O54879 Olfr1228-203ENSMUST00000216392 2145 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Hmgb3O54879 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms