Protein–RNA interactions for Protein: O35988

Sdc4, Syndecan-4, mousemouse

Known RBP Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc4O35988 Gm20920-201ENSMUST00000187477 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21627-201ENSMUST00000187768 918 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20850-201ENSMUST00000188672 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21488-201ENSMUST00000188744 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20820-201ENSMUST00000188754 921 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20894-201ENSMUST00000188864 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20869-201ENSMUST00000188958 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm7858-201ENSMUST00000190177 622 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29573-201ENSMUST00000190291 919 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm20843-202ENSMUST00000191305 925 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm44058-201ENSMUST00000204335 467 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Olfr886-ps1-201ENSMUST00000212395 708 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm14440-201ENSMUST00000098998 192 ntTSL 5 BASIC1.64□□□□□ -2.15
Sdc4O35988 Gm14405-201ENSMUST00000117808 2330 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm1980-201ENSMUST00000123131 2306 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Gm44679-201ENSMUST00000207202 2908 ntBASIC1.64□□□□□ -2.15
Sdc4O35988 Mir208b-201ENSMUST00000104735 77 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm13714-201ENSMUST00000117313 221 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm5646-201ENSMUST00000120568 714 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm5287-201ENSMUST00000120666 598 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm15281-201ENSMUST00000125181 351 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm15562-201ENSMUST00000161397 426 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Sdc4O35988 Gm5277-201ENSMUST00000164923 556 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Adgrg4-206ENSMUST00000168724 531 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Trav12-4-201ENSMUST00000200663 271 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm43224-201ENSMUST00000201567 898 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm43897-201ENSMUST00000204019 309 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Olfr192-202ENSMUST00000205727 1141 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Sdc4O35988 Gm44657-201ENSMUST00000208568 450 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm45247-201ENSMUST00000210757 309 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Gm19233-201ENSMUST00000219772 936 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 CT010480.1-201ENSMUST00000223612 363 ntBASIC1.63□□□□□ -2.15
Sdc4O35988 Il1rapl1-202ENSMUST00000113964 1936 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Sdc4O35988 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Sdc4O35988 Olfr1313-203ENSMUST00000216071 2599 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Sdc4O35988 Olfr1018-202ENSMUST00000214416 3186 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Sdc4O35988 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
Sdc4O35988 Gm6913-201ENSMUST00000100019 348 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm14677-201ENSMUST00000117866 486 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm14517-201ENSMUST00000119040 337 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Sdc4O35988 Gm26000-201ENSMUST00000157991 107 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm22386-201ENSMUST00000158192 129 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm15689-201ENSMUST00000160604 1159 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
Sdc4O35988 Gm17655-201ENSMUST00000167969 255 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm7346-201ENSMUST00000169661 476 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Olfr306-ps1-201ENSMUST00000174677 743 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Vmn1r-ps10-201ENSMUST00000176165 889 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Vmn2r-ps34-201ENSMUST00000177433 904 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm24925-201ENSMUST00000178157 107 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm26864-201ENSMUST00000181346 156 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm9892-201ENSMUST00000182415 992 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm27520-201ENSMUST00000184872 81 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm37098-201ENSMUST00000192290 244 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm37213-201ENSMUST00000193077 586 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm44404-201ENSMUST00000203979 636 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm31294-201ENSMUST00000211216 138 ntTSL 5 BASIC1.62□□□□□ -2.15
Sdc4O35988 AC151843.1-201ENSMUST00000215960 691 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 CT025552.1-201ENSMUST00000224561 521 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 AC154271.1-201ENSMUST00000224780 383 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 n-R5s79-201ENSMUST00000083071 120 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Gm25792-201ENSMUST00000083289 100 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Mir124a-3-201ENSMUST00000083520 68 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Mir320-201ENSMUST00000083594 82 ntBASIC1.62□□□□□ -2.15
Sdc4O35988 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
Sdc4O35988 Olfr138-203ENSMUST00000173841 1865 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
Sdc4O35988 Gm23431-201ENSMUST00000104006 107 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm6806-201ENSMUST00000120092 1006 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm12640-201ENSMUST00000120097 310 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm26105-201ENSMUST00000157253 190 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm24552-201ENSMUST00000158646 103 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm2855-201ENSMUST00000166765 456 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Arpp19-211ENSMUST00000170310 899 ntTSL 3 BASIC1.61□□□□□ -2.15
Sdc4O35988 Vmn2r-ps55-201ENSMUST00000173834 240 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Mir3112-201ENSMUST00000175431 82 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Ighv1-6-201ENSMUST00000193849 293 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm43193-201ENSMUST00000197732 441 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm26379-202ENSMUST00000200225 132 ntBASIC1.61□□□□□ -2.15
Sdc4O35988 Gm35262-201ENSMUST00000215133 267 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms